Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt1P04104 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.46■□□□□ 0.38
Krt1P04104 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Krt1P04104 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt1P04104 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt1P04104 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt1P04104 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt1P04104 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Krt1P04104 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Krt1P04104 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt1P04104 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt1P04104 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.45■□□□□ 0.38
Krt1P04104 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Krt1P04104 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt1P04104 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Krt1P04104 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt1P04104 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Krt1P04104 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Krt1P04104 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Krt1P04104 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Krt1P04104 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Krt1P04104 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Krt1P04104 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Krt1P04104 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Krt1P04104 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Krt1P04104 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Krt1P04104 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.44■□□□□ 0.38
Krt1P04104 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Krt1P04104 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Krt1P04104 Gm43566-201ENSMUST00000196851 808 ntBASIC17.44■□□□□ 0.38
Krt1P04104 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Krt1P04104 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Krt1P04104 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Krt1P04104 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Krt1P04104 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.44■□□□□ 0.38
Krt1P04104 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.44■□□□□ 0.38
Krt1P04104 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Krt1P04104 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.44■□□□□ 0.38
Krt1P04104 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Krt1P04104 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Krt1P04104 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Krt1P04104 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Krt1P04104 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Krt1P04104 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Krt1P04104 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Krt1P04104 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Krt1P04104 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Krt1P04104 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Krt1P04104 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Krt1P04104 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Krt1P04104 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Krt1P04104 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Krt1P04104 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.42■□□□□ 0.38
Krt1P04104 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Krt1P04104 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Krt1P04104 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Krt1P04104 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Krt1P04104 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Krt1P04104 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Krt1P04104 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Krt1P04104 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Krt1P04104 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Krt1P04104 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Krt1P04104 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Krt1P04104 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Krt1P04104 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Krt1P04104 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Krt1P04104 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Krt1P04104 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Krt1P04104 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.41■□□□□ 0.38
Krt1P04104 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.41■□□□□ 0.38
Krt1P04104 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.41■□□□□ 0.38
Krt1P04104 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Krt1P04104 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Krt1P04104 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.41■□□□□ 0.38
Krt1P04104 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Krt1P04104 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Krt1P04104 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Krt1P04104 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Krt1P04104 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt1P04104 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt1P04104 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt1P04104 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Krt1P04104 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
Krt1P04104 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt1P04104 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.4■□□□□ 0.38
Krt1P04104 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt1P04104 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt1P04104 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt1P04104 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Krt1P04104 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt1P04104 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.4■□□□□ 0.38
Krt1P04104 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt1P04104 Serp2-204ENSMUST00000228055 705 ntBASIC17.39■□□□□ 0.37
Krt1P04104 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt1P04104 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt1P04104 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt1P04104 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt1P04104 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt1P04104 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms