Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CopeO89079 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19■□□□□ 0.63
CopeO89079 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CopeO89079 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CopeO89079 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CopeO89079 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CopeO89079 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CopeO89079 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CopeO89079 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CopeO89079 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CopeO89079 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CopeO89079 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CopeO89079 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.99■□□□□ 0.63
CopeO89079 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CopeO89079 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CopeO89079 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CopeO89079 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CopeO89079 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CopeO89079 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CopeO89079 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
CopeO89079 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CopeO89079 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CopeO89079 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CopeO89079 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CopeO89079 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.98■□□□□ 0.63
CopeO89079 Mir7075-201ENSMUST00000184187 82 ntBASIC18.98■□□□□ 0.63
CopeO89079 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.98■□□□□ 0.63
CopeO89079 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CopeO89079 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CopeO89079 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CopeO89079 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CopeO89079 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CopeO89079 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CopeO89079 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CopeO89079 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CopeO89079 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CopeO89079 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CopeO89079 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CopeO89079 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CopeO89079 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CopeO89079 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CopeO89079 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.97■□□□□ 0.63
CopeO89079 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CopeO89079 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CopeO89079 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CopeO89079 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CopeO89079 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CopeO89079 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CopeO89079 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CopeO89079 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CopeO89079 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.96■□□□□ 0.63
CopeO89079 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CopeO89079 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CopeO89079 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CopeO89079 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
CopeO89079 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CopeO89079 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CopeO89079 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.96■□□□□ 0.63
CopeO89079 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CopeO89079 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CopeO89079 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CopeO89079 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CopeO89079 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CopeO89079 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.95■□□□□ 0.62
CopeO89079 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CopeO89079 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CopeO89079 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.95■□□□□ 0.62
CopeO89079 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CopeO89079 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CopeO89079 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CopeO89079 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.95■□□□□ 0.62
CopeO89079 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CopeO89079 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CopeO89079 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CopeO89079 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CopeO89079 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CopeO89079 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CopeO89079 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CopeO89079 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CopeO89079 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
CopeO89079 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CopeO89079 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CopeO89079 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CopeO89079 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.94■□□□□ 0.62
CopeO89079 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CopeO89079 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CopeO89079 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CopeO89079 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CopeO89079 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CopeO89079 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.94■□□□□ 0.62
CopeO89079 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CopeO89079 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CopeO89079 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CopeO89079 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CopeO89079 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CopeO89079 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CopeO89079 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CopeO89079 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CopeO89079 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CopeO89079 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms