Protein–RNA interactions for Protein: O88888

Apba3, Amyloid-beta A4 precursor protein-binding family A member 3, mousemouse

Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apba3O88888 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.14■□□□□ 0.81
Apba3O88888 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Apba3O88888 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Apba3O88888 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Apba3O88888 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.14■□□□□ 0.81
Apba3O88888 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Apba3O88888 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Apba3O88888 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Apba3O88888 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Apba3O88888 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Apba3O88888 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Apba3O88888 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Apba3O88888 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Apba3O88888 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.13■□□□□ 0.81
Apba3O88888 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Apba3O88888 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Apba3O88888 Gm11927-201ENSMUST00000118472 759 ntBASIC20.13■□□□□ 0.81
Apba3O88888 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Apba3O88888 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.13■□□□□ 0.81
Apba3O88888 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Apba3O88888 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Apba3O88888 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Apba3O88888 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Apba3O88888 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Apba3O88888 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Apba3O88888 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Apba3O88888 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Apba3O88888 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Apba3O88888 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Apba3O88888 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Apba3O88888 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.12■□□□□ 0.81
Apba3O88888 Gm22325-201ENSMUST00000158904 308 ntBASIC20.12■□□□□ 0.81
Apba3O88888 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Apba3O88888 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.12■□□□□ 0.81
Apba3O88888 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Apba3O88888 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.12■□□□□ 0.81
Apba3O88888 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Apba3O88888 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Apba3O88888 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Apba3O88888 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Apba3O88888 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Apba3O88888 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Apba3O88888 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Apba3O88888 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Apba3O88888 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Apba3O88888 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Apba3O88888 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Apba3O88888 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Apba3O88888 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.11■□□□□ 0.81
Apba3O88888 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Apba3O88888 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Apba3O88888 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Apba3O88888 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.11■□□□□ 0.81
Apba3O88888 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.11■□□□□ 0.81
Apba3O88888 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.11■□□□□ 0.81
Apba3O88888 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Apba3O88888 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Apba3O88888 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.11■□□□□ 0.81
Apba3O88888 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Apba3O88888 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Apba3O88888 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
Apba3O88888 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.1■□□□□ 0.81
Apba3O88888 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.1■□□□□ 0.81
Apba3O88888 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Apba3O88888 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Apba3O88888 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.1■□□□□ 0.81
Apba3O88888 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.1■□□□□ 0.81
Apba3O88888 Gm10698-201ENSMUST00000182663 604 ntBASIC20.1■□□□□ 0.81
Apba3O88888 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Apba3O88888 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.1■□□□□ 0.81
Apba3O88888 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Apba3O88888 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Apba3O88888 Mtag2-201ENSMUST00000058665 714 ntBASIC20.1■□□□□ 0.81
Apba3O88888 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Apba3O88888 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
Apba3O88888 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Apba3O88888 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Apba3O88888 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Apba3O88888 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Apba3O88888 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Apba3O88888 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Apba3O88888 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Apba3O88888 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Apba3O88888 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Apba3O88888 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Apba3O88888 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.09■□□□□ 0.81
Apba3O88888 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.09■□□□□ 0.81
Apba3O88888 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Apba3O88888 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.09■□□□□ 0.81
Apba3O88888 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Apba3O88888 Flg-201ENSMUST00000050758 1488 ntBASIC20.09■□□□□ 0.81
Apba3O88888 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Apba3O88888 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Apba3O88888 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Apba3O88888 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Apba3O88888 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Apba3O88888 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.08■□□□□ 0.81
Apba3O88888 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Apba3O88888 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Apba3O88888 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms