Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Best1O88870 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Best1O88870 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Best1O88870 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Best1O88870 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Best1O88870 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Best1O88870 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Best1O88870 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Best1O88870 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Best1O88870 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Best1O88870 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Best1O88870 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Best1O88870 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.72■□□□□ 0.43
Best1O88870 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Best1O88870 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.72■□□□□ 0.43
Best1O88870 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
Best1O88870 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Best1O88870 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Best1O88870 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Best1O88870 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.72■□□□□ 0.43
Best1O88870 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Best1O88870 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Best1O88870 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Best1O88870 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.71■□□□□ 0.43
Best1O88870 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Best1O88870 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Best1O88870 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Best1O88870 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.71■□□□□ 0.43
Best1O88870 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.71■□□□□ 0.43
Best1O88870 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Best1O88870 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Best1O88870 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Best1O88870 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Best1O88870 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Best1O88870 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.71■□□□□ 0.43
Best1O88870 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Best1O88870 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.71■□□□□ 0.43
Best1O88870 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Best1O88870 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Best1O88870 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Best1O88870 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Best1O88870 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Best1O88870 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Best1O88870 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Best1O88870 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.7■□□□□ 0.42
Best1O88870 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Best1O88870 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Best1O88870 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Best1O88870 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Best1O88870 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Best1O88870 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Best1O88870 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Best1O88870 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.69■□□□□ 0.42
Best1O88870 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.69■□□□□ 0.42
Best1O88870 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Best1O88870 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Best1O88870 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Best1O88870 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Best1O88870 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Best1O88870 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Best1O88870 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Best1O88870 Gm15378-201ENSMUST00000121894 207 ntBASIC17.68■□□□□ 0.42
Best1O88870 Gm10138-203ENSMUST00000206952 366 ntBASIC17.68■□□□□ 0.42
Best1O88870 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.68■□□□□ 0.42
Best1O88870 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Best1O88870 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Best1O88870 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Best1O88870 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Best1O88870 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Best1O88870 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Best1O88870 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Best1O88870 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.67■□□□□ 0.42
Best1O88870 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Best1O88870 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.67■□□□□ 0.42
Best1O88870 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Best1O88870 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.67■□□□□ 0.42
Best1O88870 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.67■□□□□ 0.42
Best1O88870 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Best1O88870 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.67■□□□□ 0.42
Best1O88870 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Best1O88870 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.67■□□□□ 0.42
Best1O88870 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Best1O88870 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Best1O88870 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.67■□□□□ 0.42
Best1O88870 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Best1O88870 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Best1O88870 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Best1O88870 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Best1O88870 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Best1O88870 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Best1O88870 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Best1O88870 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Best1O88870 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Best1O88870 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Best1O88870 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Best1O88870 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Best1O88870 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.66■□□□□ 0.42
Best1O88870 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.66■□□□□ 0.42
Best1O88870 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Best1O88870 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms