Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hcn1O88704 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hcn1O88704 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Hcn1O88704 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Hcn1O88704 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Hcn1O88704 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.57■□□□□ 0.4
Hcn1O88704 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hcn1O88704 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Hcn1O88704 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.57■□□□□ 0.4
Hcn1O88704 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.57■□□□□ 0.4
Hcn1O88704 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hcn1O88704 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hcn1O88704 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hcn1O88704 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Hcn1O88704 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hcn1O88704 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Hcn1O88704 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hcn1O88704 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hcn1O88704 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hcn1O88704 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hcn1O88704 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.56■□□□□ 0.4
Hcn1O88704 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcn1O88704 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Hcn1O88704 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcn1O88704 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcn1O88704 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcn1O88704 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Hcn1O88704 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcn1O88704 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcn1O88704 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
Hcn1O88704 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Hcn1O88704 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.56■□□□□ 0.4
Hcn1O88704 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcn1O88704 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcn1O88704 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Hcn1O88704 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcn1O88704 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hcn1O88704 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcn1O88704 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcn1O88704 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcn1O88704 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcn1O88704 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcn1O88704 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcn1O88704 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hcn1O88704 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.55■□□□□ 0.4
Hcn1O88704 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.55■□□□□ 0.4
Hcn1O88704 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.55■□□□□ 0.4
Hcn1O88704 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.55■□□□□ 0.4
Hcn1O88704 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcn1O88704 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcn1O88704 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Hcn1O88704 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hcn1O88704 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hcn1O88704 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hcn1O88704 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hcn1O88704 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.54■□□□□ 0.4
Hcn1O88704 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Hcn1O88704 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hcn1O88704 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hcn1O88704 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hcn1O88704 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.54■□□□□ 0.4
Hcn1O88704 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.54■□□□□ 0.4
Hcn1O88704 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hcn1O88704 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hcn1O88704 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Hcn1O88704 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hcn1O88704 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hcn1O88704 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.54■□□□□ 0.4
Hcn1O88704 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hcn1O88704 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hcn1O88704 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hcn1O88704 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hcn1O88704 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hcn1O88704 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Hcn1O88704 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hcn1O88704 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hcn1O88704 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hcn1O88704 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.53■□□□□ 0.4
Hcn1O88704 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.53■□□□□ 0.4
Hcn1O88704 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hcn1O88704 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hcn1O88704 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Hcn1O88704 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hcn1O88704 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hcn1O88704 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hcn1O88704 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hcn1O88704 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hcn1O88704 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hcn1O88704 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hcn1O88704 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hcn1O88704 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hcn1O88704 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hcn1O88704 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hcn1O88704 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hcn1O88704 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Hcn1O88704 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Hcn1O88704 Gm7514-201ENSMUST00000209475 934 ntBASIC17.52■□□□□ 0.4
Hcn1O88704 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hcn1O88704 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hcn1O88704 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms