Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf17O88472 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Tnfrsf17O88472 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf17O88472 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Tnfrsf17O88472 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf17O88472 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf17O88472 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.13■□□□□ 0.33
Tnfrsf17O88472 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf17O88472 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf17O88472 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf17O88472 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf17O88472 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf17O88472 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf17O88472 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.12■□□□□ 0.33
Tnfrsf17O88472 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf17O88472 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Tnfrsf17O88472 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Tnfrsf17O88472 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Tnfrsf17O88472 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf17O88472 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf17O88472 Gm17661-201ENSMUST00000170317 270 ntBASIC17.12■□□□□ 0.33
Tnfrsf17O88472 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf17O88472 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf17O88472 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf17O88472 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf17O88472 Gm5867-201ENSMUST00000063197 592 ntBASIC17.12■□□□□ 0.33
Tnfrsf17O88472 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Tnfrsf17O88472 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf17O88472 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf17O88472 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.12■□□□□ 0.33
Tnfrsf17O88472 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.11■□□□□ 0.33
Tnfrsf17O88472 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf17O88472 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.11■□□□□ 0.33
Tnfrsf17O88472 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tnfrsf17O88472 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.11■□□□□ 0.33
Tnfrsf17O88472 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf17O88472 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tnfrsf17O88472 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Tnfrsf17O88472 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.11■□□□□ 0.33
Tnfrsf17O88472 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf17O88472 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf17O88472 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Tnfrsf17O88472 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf17O88472 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf17O88472 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf17O88472 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf17O88472 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf17O88472 Mir5130-201ENSMUST00000175160 84 ntBASIC17.1■□□□□ 0.33
Tnfrsf17O88472 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.1■□□□□ 0.33
Tnfrsf17O88472 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf17O88472 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf17O88472 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf17O88472 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf17O88472 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf17O88472 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf17O88472 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf17O88472 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf17O88472 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf17O88472 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Tnfrsf17O88472 Gm25016-201ENSMUST00000158399 131 ntBASIC17.09■□□□□ 0.33
Tnfrsf17O88472 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Tnfrsf17O88472 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf17O88472 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf17O88472 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf17O88472 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf17O88472 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf17O88472 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf17O88472 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf17O88472 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf17O88472 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Tnfrsf17O88472 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Tnfrsf17O88472 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf17O88472 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf17O88472 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf17O88472 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.08■□□□□ 0.32
Tnfrsf17O88472 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Tnfrsf17O88472 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.08■□□□□ 0.32
Tnfrsf17O88472 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf17O88472 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf17O88472 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf17O88472 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf17O88472 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf17O88472 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf17O88472 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf17O88472 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Tnfrsf17O88472 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf17O88472 Gm28033-201ENSMUST00000184224 96 ntBASIC17.07■□□□□ 0.32
Tnfrsf17O88472 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.07■□□□□ 0.32
Tnfrsf17O88472 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf17O88472 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf17O88472 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf17O88472 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf17O88472 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Tnfrsf17O88472 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf17O88472 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf17O88472 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf17O88472 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Tnfrsf17O88472 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf17O88472 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
Tnfrsf17O88472 Gm22697-201ENSMUST00000175194 63 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms