Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.01■□□□□ 0.47
Cdh16O88338 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh16O88338 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
Cdh16O88338 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh16O88338 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
Cdh16O88338 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.01■□□□□ 0.47
Cdh16O88338 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cdh16O88338 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh16O88338 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh16O88338 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Cdh16O88338 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh16O88338 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh16O88338 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh16O88338 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdh16O88338 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh16O88338 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh16O88338 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh16O88338 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdh16O88338 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh16O88338 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh16O88338 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Cdh16O88338 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18■□□□□ 0.47
Cdh16O88338 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh16O88338 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18■□□□□ 0.47
Cdh16O88338 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdh16O88338 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh16O88338 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.99■□□□□ 0.47
Cdh16O88338 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh16O88338 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cdh16O88338 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh16O88338 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh16O88338 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.99■□□□□ 0.47
Cdh16O88338 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh16O88338 Gm9847-201ENSMUST00000052528 599 ntBASIC17.99■□□□□ 0.47
Cdh16O88338 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh16O88338 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh16O88338 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh16O88338 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cdh16O88338 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh16O88338 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh16O88338 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.98■□□□□ 0.47
Cdh16O88338 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh16O88338 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.98■□□□□ 0.47
Cdh16O88338 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh16O88338 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.98■□□□□ 0.47
Cdh16O88338 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh16O88338 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh16O88338 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh16O88338 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh16O88338 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh16O88338 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh16O88338 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh16O88338 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh16O88338 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh16O88338 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh16O88338 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh16O88338 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh16O88338 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh16O88338 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cdh16O88338 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh16O88338 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh16O88338 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh16O88338 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh16O88338 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh16O88338 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.97■□□□□ 0.47
Cdh16O88338 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh16O88338 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.97■□□□□ 0.47
Cdh16O88338 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh16O88338 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh16O88338 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh16O88338 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh16O88338 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh16O88338 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Cdh16O88338 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh16O88338 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh16O88338 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh16O88338 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cdh16O88338 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh16O88338 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh16O88338 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.96■□□□□ 0.47
Cdh16O88338 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh16O88338 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Cdh16O88338 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh16O88338 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh16O88338 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cdh16O88338 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh16O88338 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh16O88338 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.95■□□□□ 0.46
Cdh16O88338 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh16O88338 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh16O88338 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cdh16O88338 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.95■□□□□ 0.46
Cdh16O88338 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh16O88338 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh16O88338 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh16O88338 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh16O88338 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.95■□□□□ 0.46
Cdh16O88338 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh16O88338 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh16O88338 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms