Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.22□□□□□ -0.13
Gm10226O88253 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10226O88253 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10226O88253 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10226O88253 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10226O88253 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10226O88253 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Gm10226O88253 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10226O88253 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10226O88253 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10226O88253 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10226O88253 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10226O88253 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10226O88253 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10226O88253 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10226O88253 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.21□□□□□ -0.13
Gm10226O88253 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10226O88253 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10226O88253 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10226O88253 Flg-201ENSMUST00000050758 1488 ntBASIC14.21□□□□□ -0.13
Gm10226O88253 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10226O88253 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10226O88253 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10226O88253 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10226O88253 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10226O88253 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm10226O88253 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm10226O88253 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.21□□□□□ -0.14
Gm10226O88253 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm10226O88253 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10226O88253 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10226O88253 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10226O88253 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10226O88253 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.2□□□□□ -0.14
Gm10226O88253 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.2□□□□□ -0.14
Gm10226O88253 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10226O88253 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Gm10226O88253 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10226O88253 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Gm10226O88253 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10226O88253 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10226O88253 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10226O88253 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10226O88253 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10226O88253 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.2□□□□□ -0.14
Gm10226O88253 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10226O88253 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10226O88253 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10226O88253 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10226O88253 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10226O88253 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10226O88253 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Gm10226O88253 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10226O88253 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10226O88253 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10226O88253 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10226O88253 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.19□□□□□ -0.14
Gm10226O88253 Gm8520-201ENSMUST00000186517 868 ntBASIC14.19□□□□□ -0.14
Gm10226O88253 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Gm10226O88253 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10226O88253 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Gm10226O88253 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10226O88253 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10226O88253 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.19□□□□□ -0.14
Gm10226O88253 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10226O88253 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10226O88253 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10226O88253 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10226O88253 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10226O88253 Gm11249-201ENSMUST00000117071 859 ntBASIC14.18□□□□□ -0.14
Gm10226O88253 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Gm10226O88253 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10226O88253 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Gm10226O88253 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10226O88253 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10226O88253 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Gm10226O88253 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10226O88253 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10226O88253 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10226O88253 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.18□□□□□ -0.14
Gm10226O88253 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10226O88253 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm10226O88253 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Gm10226O88253 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm10226O88253 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm10226O88253 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm10226O88253 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm10226O88253 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Gm10226O88253 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm10226O88253 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Gm10226O88253 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm10226O88253 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm10226O88253 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm10226O88253 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm10226O88253 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm10226O88253 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm10226O88253 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm10226O88253 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm10226O88253 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm10226O88253 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms