Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ldb2O55203 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ldb2O55203 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ldb2O55203 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ldb2O55203 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.29■□□□□ 0.52
Ldb2O55203 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.29■□□□□ 0.52
Ldb2O55203 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ldb2O55203 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ldb2O55203 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.29■□□□□ 0.52
Ldb2O55203 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ldb2O55203 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ldb2O55203 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ldb2O55203 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ldb2O55203 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ldb2O55203 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ldb2O55203 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ldb2O55203 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.28■□□□□ 0.52
Ldb2O55203 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ldb2O55203 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ldb2O55203 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ldb2O55203 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.28■□□□□ 0.52
Ldb2O55203 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.28■□□□□ 0.52
Ldb2O55203 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ldb2O55203 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ldb2O55203 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ldb2O55203 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.28■□□□□ 0.52
Ldb2O55203 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ldb2O55203 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ldb2O55203 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.27■□□□□ 0.52
Ldb2O55203 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ldb2O55203 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ldb2O55203 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ldb2O55203 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ldb2O55203 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ldb2O55203 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.27■□□□□ 0.52
Ldb2O55203 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Ldb2O55203 Gm7290-201ENSMUST00000104990 617 ntBASIC18.27■□□□□ 0.52
Ldb2O55203 Gm12918-201ENSMUST00000120234 636 ntBASIC18.27■□□□□ 0.52
Ldb2O55203 Gm15710-201ENSMUST00000121821 636 ntBASIC18.27■□□□□ 0.52
Ldb2O55203 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ldb2O55203 Gm37179-201ENSMUST00000194862 823 ntBASIC18.27■□□□□ 0.52
Ldb2O55203 Gm5075-201ENSMUST00000196916 622 ntBASIC18.27■□□□□ 0.52
Ldb2O55203 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.27■□□□□ 0.52
Ldb2O55203 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.27■□□□□ 0.52
Ldb2O55203 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ldb2O55203 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ldb2O55203 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.27■□□□□ 0.52
Ldb2O55203 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ldb2O55203 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ldb2O55203 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ldb2O55203 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ldb2O55203 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ldb2O55203 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ldb2O55203 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ldb2O55203 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ldb2O55203 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Ldb2O55203 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ldb2O55203 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ldb2O55203 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.26■□□□□ 0.51
Ldb2O55203 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ldb2O55203 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.26■□□□□ 0.51
Ldb2O55203 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ldb2O55203 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Ldb2O55203 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.26■□□□□ 0.51
Ldb2O55203 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ldb2O55203 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.26■□□□□ 0.51
Ldb2O55203 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ldb2O55203 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ldb2O55203 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ldb2O55203 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.26■□□□□ 0.51
Ldb2O55203 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ldb2O55203 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ldb2O55203 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ldb2O55203 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ldb2O55203 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.25■□□□□ 0.51
Ldb2O55203 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Ldb2O55203 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ldb2O55203 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ldb2O55203 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.25■□□□□ 0.51
Ldb2O55203 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.25■□□□□ 0.51
Ldb2O55203 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Ldb2O55203 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Ldb2O55203 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ldb2O55203 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.25■□□□□ 0.51
Ldb2O55203 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ldb2O55203 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.25■□□□□ 0.51
Ldb2O55203 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ldb2O55203 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ldb2O55203 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Ldb2O55203 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.24■□□□□ 0.51
Ldb2O55203 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Ldb2O55203 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ldb2O55203 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Ldb2O55203 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Ldb2O55203 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Ldb2O55203 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ldb2O55203 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ldb2O55203 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ldb2O55203 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.23■□□□□ 0.51
Ldb2O55203 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms