Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.45■□□□□ 0.7
Pja1O55176 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.45■□□□□ 0.7
Pja1O55176 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pja1O55176 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pja1O55176 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pja1O55176 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pja1O55176 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pja1O55176 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pja1O55176 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pja1O55176 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pja1O55176 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pja1O55176 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pja1O55176 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pja1O55176 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Pja1O55176 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pja1O55176 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.44■□□□□ 0.7
Pja1O55176 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Pja1O55176 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pja1O55176 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.44■□□□□ 0.7
Pja1O55176 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pja1O55176 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Pja1O55176 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pja1O55176 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pja1O55176 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Pja1O55176 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pja1O55176 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pja1O55176 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pja1O55176 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pja1O55176 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pja1O55176 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.43■□□□□ 0.7
Pja1O55176 Gm45417-201ENSMUST00000209533 758 ntBASIC19.43■□□□□ 0.7
Pja1O55176 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.43■□□□□ 0.7
Pja1O55176 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.43■□□□□ 0.7
Pja1O55176 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pja1O55176 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.43■□□□□ 0.7
Pja1O55176 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pja1O55176 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pja1O55176 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pja1O55176 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pja1O55176 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pja1O55176 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pja1O55176 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Pja1O55176 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pja1O55176 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pja1O55176 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pja1O55176 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pja1O55176 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pja1O55176 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pja1O55176 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pja1O55176 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pja1O55176 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pja1O55176 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pja1O55176 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pja1O55176 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Pja1O55176 Gm43017-201ENSMUST00000198296 752 ntBASIC19.42■□□□□ 0.7
Pja1O55176 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Pja1O55176 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pja1O55176 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pja1O55176 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pja1O55176 Fst-202ENSMUST00000223640 2612 ntBASIC19.42■□□□□ 0.7
Pja1O55176 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pja1O55176 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pja1O55176 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Pja1O55176 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pja1O55176 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pja1O55176 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.42■□□□□ 0.7
Pja1O55176 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pja1O55176 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pja1O55176 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pja1O55176 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pja1O55176 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.41■□□□□ 0.7
Pja1O55176 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.41■□□□□ 0.7
Pja1O55176 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pja1O55176 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Pja1O55176 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.41■□□□□ 0.7
Pja1O55176 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.41■□□□□ 0.7
Pja1O55176 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Pja1O55176 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Pja1O55176 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pja1O55176 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pja1O55176 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pja1O55176 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pja1O55176 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pja1O55176 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pja1O55176 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pja1O55176 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pja1O55176 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pja1O55176 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.4■□□□□ 0.7
Pja1O55176 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pja1O55176 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pja1O55176 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pja1O55176 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pja1O55176 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pja1O55176 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pja1O55176 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pja1O55176 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pja1O55176 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Pja1O55176 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pja1O55176 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pja1O55176 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms