Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prom1O54990 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prom1O54990 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prom1O54990 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.38■□□□□ 0.85
Prom1O54990 Gm43183-201ENSMUST00000200632 547 ntBASIC20.38■□□□□ 0.85
Prom1O54990 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.38■□□□□ 0.85
Prom1O54990 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Prom1O54990 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prom1O54990 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prom1O54990 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prom1O54990 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Prom1O54990 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prom1O54990 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prom1O54990 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Prom1O54990 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Prom1O54990 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Prom1O54990 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Prom1O54990 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prom1O54990 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Prom1O54990 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prom1O54990 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Prom1O54990 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Prom1O54990 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prom1O54990 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prom1O54990 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.36■□□□□ 0.85
Prom1O54990 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Prom1O54990 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Prom1O54990 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prom1O54990 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prom1O54990 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Prom1O54990 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Prom1O54990 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Prom1O54990 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.35■□□□□ 0.85
Prom1O54990 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prom1O54990 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prom1O54990 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prom1O54990 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.35■□□□□ 0.85
Prom1O54990 Gm42545-201ENSMUST00000202755 922 ntBASIC20.35■□□□□ 0.85
Prom1O54990 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.35■□□□□ 0.85
Prom1O54990 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Prom1O54990 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prom1O54990 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prom1O54990 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prom1O54990 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prom1O54990 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prom1O54990 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prom1O54990 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prom1O54990 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Prom1O54990 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prom1O54990 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Prom1O54990 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Prom1O54990 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prom1O54990 Gm43799-201ENSMUST00000201845 579 ntBASIC20.34■□□□□ 0.85
Prom1O54990 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.34■□□□□ 0.85
Prom1O54990 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prom1O54990 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Prom1O54990 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Prom1O54990 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Prom1O54990 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.33■□□□□ 0.85
Prom1O54990 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.33■□□□□ 0.85
Prom1O54990 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.33■□□□□ 0.85
Prom1O54990 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Prom1O54990 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Prom1O54990 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Prom1O54990 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Prom1O54990 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.33■□□□□ 0.84
Prom1O54990 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Prom1O54990 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.33■□□□□ 0.84
Prom1O54990 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Prom1O54990 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Prom1O54990 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Prom1O54990 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.33■□□□□ 0.84
Prom1O54990 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prom1O54990 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prom1O54990 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Prom1O54990 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prom1O54990 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
Prom1O54990 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Prom1O54990 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prom1O54990 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prom1O54990 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Prom1O54990 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Prom1O54990 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Prom1O54990 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.31■□□□□ 0.84
Prom1O54990 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.31■□□□□ 0.84
Prom1O54990 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prom1O54990 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prom1O54990 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prom1O54990 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prom1O54990 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Prom1O54990 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prom1O54990 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Prom1O54990 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Prom1O54990 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Prom1O54990 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.3■□□□□ 0.84
Prom1O54990 Gm18025-201ENSMUST00000221733 862 ntBASIC20.3■□□□□ 0.84
Prom1O54990 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.3■□□□□ 0.84
Prom1O54990 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Prom1O54990 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prom1O54990 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms