Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Matn3O35701 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Matn3O35701 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Matn3O35701 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Matn3O35701 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Matn3O35701 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.69■□□□□ 0.26
Matn3O35701 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Matn3O35701 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Matn3O35701 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Matn3O35701 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Matn3O35701 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.69■□□□□ 0.26
Matn3O35701 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Matn3O35701 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Matn3O35701 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Matn3O35701 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Matn3O35701 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Matn3O35701 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.69■□□□□ 0.26
Matn3O35701 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Matn3O35701 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Matn3O35701 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Matn3O35701 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Matn3O35701 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.68■□□□□ 0.26
Matn3O35701 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.68■□□□□ 0.26
Matn3O35701 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Matn3O35701 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Matn3O35701 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Matn3O35701 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Matn3O35701 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Matn3O35701 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Matn3O35701 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Matn3O35701 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.67■□□□□ 0.26
Matn3O35701 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Matn3O35701 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Matn3O35701 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Matn3O35701 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Matn3O35701 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Matn3O35701 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Matn3O35701 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Matn3O35701 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Matn3O35701 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Matn3O35701 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Matn3O35701 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Matn3O35701 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Matn3O35701 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Matn3O35701 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.66■□□□□ 0.26
Matn3O35701 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Matn3O35701 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Matn3O35701 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Matn3O35701 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Matn3O35701 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Matn3O35701 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Matn3O35701 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Matn3O35701 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Matn3O35701 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Matn3O35701 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.66■□□□□ 0.26
Matn3O35701 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Matn3O35701 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Matn3O35701 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Matn3O35701 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Matn3O35701 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Matn3O35701 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Matn3O35701 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Matn3O35701 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.65■□□□□ 0.26
Matn3O35701 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Matn3O35701 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Matn3O35701 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Matn3O35701 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Matn3O35701 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Matn3O35701 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Matn3O35701 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Matn3O35701 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Matn3O35701 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Matn3O35701 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Matn3O35701 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Matn3O35701 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Matn3O35701 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Matn3O35701 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.65■□□□□ 0.26
Matn3O35701 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Matn3O35701 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Matn3O35701 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Matn3O35701 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Matn3O35701 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Matn3O35701 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Matn3O35701 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Matn3O35701 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Matn3O35701 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.64■□□□□ 0.25
Matn3O35701 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Matn3O35701 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Matn3O35701 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.64■□□□□ 0.25
Matn3O35701 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Matn3O35701 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Matn3O35701 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Matn3O35701 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Matn3O35701 Gm12922-201ENSMUST00000120626 809 ntBASIC16.63■□□□□ 0.25
Matn3O35701 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Matn3O35701 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Matn3O35701 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Matn3O35701 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Matn3O35701 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Matn3O35701 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms