Protein–RNA interactions for Protein: O35638

Stag2, Cohesin subunit SA-2, mousemouse

Predictions only

Length 1,231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag2O35638 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Stag2O35638 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.12■□□□□ 0.97
Stag2O35638 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Stag2O35638 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Stag2O35638 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Stag2O35638 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Stag2O35638 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Stag2O35638 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stag2O35638 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stag2O35638 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.11■□□□□ 0.97
Stag2O35638 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.11■□□□□ 0.97
Stag2O35638 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stag2O35638 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stag2O35638 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stag2O35638 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stag2O35638 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stag2O35638 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Stag2O35638 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.11■□□□□ 0.97
Stag2O35638 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Stag2O35638 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Stag2O35638 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stag2O35638 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stag2O35638 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stag2O35638 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Stag2O35638 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Stag2O35638 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Stag2O35638 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.1■□□□□ 0.97
Stag2O35638 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.1■□□□□ 0.97
Stag2O35638 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Stag2O35638 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Stag2O35638 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Stag2O35638 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Stag2O35638 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Stag2O35638 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Stag2O35638 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Stag2O35638 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Stag2O35638 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Stag2O35638 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Stag2O35638 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Stag2O35638 Gm22325-201ENSMUST00000158904 308 ntBASIC21.09■□□□□ 0.97
Stag2O35638 Gm2559-201ENSMUST00000201323 363 ntBASIC21.09■□□□□ 0.97
Stag2O35638 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.09■□□□□ 0.97
Stag2O35638 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.09■□□□□ 0.97
Stag2O35638 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Stag2O35638 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Stag2O35638 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.09■□□□□ 0.97
Stag2O35638 Dio3-201ENSMUST00000097228 1449 ntBASIC21.09■□□□□ 0.97
Stag2O35638 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Stag2O35638 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
Stag2O35638 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Stag2O35638 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
Stag2O35638 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Stag2O35638 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Stag2O35638 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Stag2O35638 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.08■□□□□ 0.97
Stag2O35638 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Stag2O35638 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Stag2O35638 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Stag2O35638 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Stag2O35638 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Stag2O35638 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Stag2O35638 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.08■□□□□ 0.96
Stag2O35638 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Stag2O35638 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.07■□□□□ 0.96
Stag2O35638 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Stag2O35638 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Stag2O35638 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.07■□□□□ 0.96
Stag2O35638 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.07■□□□□ 0.96
Stag2O35638 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Stag2O35638 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Stag2O35638 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Stag2O35638 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Stag2O35638 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Stag2O35638 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Stag2O35638 Trmt13-210ENSMUST00000198454 880 ntBASIC21.06■□□□□ 0.96
Stag2O35638 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Stag2O35638 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Stag2O35638 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.06■□□□□ 0.96
Stag2O35638 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Stag2O35638 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Stag2O35638 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Stag2O35638 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.05■□□□□ 0.96
Stag2O35638 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Stag2O35638 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Stag2O35638 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Stag2O35638 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Stag2O35638 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Stag2O35638 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Stag2O35638 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Stag2O35638 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Stag2O35638 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.04■□□□□ 0.96
Stag2O35638 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Stag2O35638 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Stag2O35638 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Stag2O35638 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Stag2O35638 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Stag2O35638 Gm2399-201ENSMUST00000104944 225 ntBASIC21.04■□□□□ 0.96
Stag2O35638 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.04■□□□□ 0.96
Stag2O35638 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.04■□□□□ 0.96
Stag2O35638 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms