Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Capn1O35350 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.97■□□□□ 0.31
Capn1O35350 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Capn1O35350 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Capn1O35350 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Capn1O35350 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Capn1O35350 Golph3-205ENSMUST00000228671 2842 ntBASIC16.97■□□□□ 0.31
Capn1O35350 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Capn1O35350 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Capn1O35350 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Capn1O35350 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Capn1O35350 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Capn1O35350 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Capn1O35350 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Capn1O35350 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Capn1O35350 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Capn1O35350 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Capn1O35350 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Capn1O35350 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Capn1O35350 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Capn1O35350 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Capn1O35350 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.96■□□□□ 0.31
Capn1O35350 Gm8520-201ENSMUST00000186517 868 ntBASIC16.96■□□□□ 0.31
Capn1O35350 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Capn1O35350 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.96■□□□□ 0.31
Capn1O35350 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Capn1O35350 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Capn1O35350 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.96■□□□□ 0.31
Capn1O35350 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Capn1O35350 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Capn1O35350 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Capn1O35350 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Capn1O35350 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Capn1O35350 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Capn1O35350 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Capn1O35350 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Capn1O35350 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Capn1O35350 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Capn1O35350 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Capn1O35350 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Capn1O35350 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.95■□□□□ 0.3
Capn1O35350 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.95■□□□□ 0.3
Capn1O35350 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
Capn1O35350 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.95■□□□□ 0.3
Capn1O35350 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Capn1O35350 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Capn1O35350 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Capn1O35350 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Capn1O35350 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Capn1O35350 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Capn1O35350 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Capn1O35350 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Capn1O35350 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Capn1O35350 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Capn1O35350 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Capn1O35350 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Capn1O35350 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.94■□□□□ 0.3
Capn1O35350 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.94■□□□□ 0.3
Capn1O35350 Gm37856-201ENSMUST00000191634 999 ntBASIC16.94■□□□□ 0.3
Capn1O35350 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Capn1O35350 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Capn1O35350 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Capn1O35350 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Capn1O35350 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Capn1O35350 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.94■□□□□ 0.3
Capn1O35350 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.94■□□□□ 0.3
Capn1O35350 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Capn1O35350 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Capn1O35350 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Capn1O35350 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Capn1O35350 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Capn1O35350 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Capn1O35350 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Capn1O35350 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Capn1O35350 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.94■□□□□ 0.3
Capn1O35350 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Capn1O35350 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Capn1O35350 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Capn1O35350 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Capn1O35350 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Capn1O35350 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Capn1O35350 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Capn1O35350 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Capn1O35350 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.93■□□□□ 0.3
Capn1O35350 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Capn1O35350 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Capn1O35350 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Capn1O35350 Rab3c-203ENSMUST00000224180 967 ntBASIC16.93■□□□□ 0.3
Capn1O35350 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.93■□□□□ 0.3
Capn1O35350 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Capn1O35350 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Capn1O35350 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Capn1O35350 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Capn1O35350 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Capn1O35350 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Capn1O35350 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Capn1O35350 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Capn1O35350 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.92■□□□□ 0.3
Capn1O35350 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Capn1O35350 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms