Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.85■□□□□ 0.77
Tnfrsf11aO35305 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfrsf11aO35305 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfrsf11aO35305 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfrsf11aO35305 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfrsf11aO35305 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfrsf11aO35305 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfrsf11aO35305 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfrsf11aO35305 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfrsf11aO35305 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfrsf11aO35305 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfrsf11aO35305 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfrsf11aO35305 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Tnfrsf11aO35305 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.84■□□□□ 0.77
Tnfrsf11aO35305 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Tnfrsf11aO35305 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tnfrsf11aO35305 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Tnfrsf11aO35305 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tnfrsf11aO35305 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Tnfrsf11aO35305 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Tnfrsf11aO35305 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tnfrsf11aO35305 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Tnfrsf11aO35305 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Tnfrsf11aO35305 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.83■□□□□ 0.77
Tnfrsf11aO35305 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tnfrsf11aO35305 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tnfrsf11aO35305 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.83■□□□□ 0.76
Tnfrsf11aO35305 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tnfrsf11aO35305 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tnfrsf11aO35305 Fst-202ENSMUST00000223640 2612 ntBASIC19.82■□□□□ 0.76
Tnfrsf11aO35305 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.82■□□□□ 0.76
Tnfrsf11aO35305 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.82■□□□□ 0.76
Tnfrsf11aO35305 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tnfrsf11aO35305 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Tnfrsf11aO35305 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Tnfrsf11aO35305 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tnfrsf11aO35305 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Tnfrsf11aO35305 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tnfrsf11aO35305 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tnfrsf11aO35305 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tnfrsf11aO35305 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Tnfrsf11aO35305 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.81■□□□□ 0.76
Tnfrsf11aO35305 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.81■□□□□ 0.76
Tnfrsf11aO35305 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Tnfrsf11aO35305 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tnfrsf11aO35305 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tnfrsf11aO35305 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Tnfrsf11aO35305 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tnfrsf11aO35305 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tnfrsf11aO35305 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Tnfrsf11aO35305 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Tnfrsf11aO35305 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tnfrsf11aO35305 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tnfrsf11aO35305 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tnfrsf11aO35305 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Tnfrsf11aO35305 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tnfrsf11aO35305 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Tnfrsf11aO35305 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tnfrsf11aO35305 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Tnfrsf11aO35305 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tnfrsf11aO35305 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tnfrsf11aO35305 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Tnfrsf11aO35305 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.8■□□□□ 0.76
Tnfrsf11aO35305 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Tnfrsf11aO35305 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Tnfrsf11aO35305 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tnfrsf11aO35305 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Tnfrsf11aO35305 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.8■□□□□ 0.76
Tnfrsf11aO35305 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Tnfrsf11aO35305 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tnfrsf11aO35305 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tnfrsf11aO35305 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Tnfrsf11aO35305 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfrsf11aO35305 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfrsf11aO35305 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.79■□□□□ 0.76
Tnfrsf11aO35305 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Tnfrsf11aO35305 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.79■□□□□ 0.76
Tnfrsf11aO35305 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfrsf11aO35305 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfrsf11aO35305 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfrsf11aO35305 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfrsf11aO35305 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.79■□□□□ 0.76
Tnfrsf11aO35305 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfrsf11aO35305 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.79■□□□□ 0.76
Tnfrsf11aO35305 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tnfrsf11aO35305 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.78■□□□□ 0.76
Tnfrsf11aO35305 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Tnfrsf11aO35305 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tnfrsf11aO35305 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Tnfrsf11aO35305 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tnfrsf11aO35305 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tnfrsf11aO35305 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tnfrsf11aO35305 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.78■□□□□ 0.76
Tnfrsf11aO35305 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Tnfrsf11aO35305 Gm29257-201ENSMUST00000186115 639 ntBASIC19.78■□□□□ 0.76
Tnfrsf11aO35305 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Tnfrsf11aO35305 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tnfrsf11aO35305 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tnfrsf11aO35305 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Tnfrsf11aO35305 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms