Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.39■□□□□ 0.21
Alx4O35137 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Alx4O35137 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.39■□□□□ 0.21
Alx4O35137 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alx4O35137 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alx4O35137 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.38■□□□□ 0.21
Alx4O35137 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Alx4O35137 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Alx4O35137 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Alx4O35137 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alx4O35137 Gm43173-201ENSMUST00000202246 593 ntBASIC16.38■□□□□ 0.21
Alx4O35137 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Alx4O35137 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alx4O35137 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.38■□□□□ 0.21
Alx4O35137 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Alx4O35137 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Alx4O35137 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alx4O35137 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alx4O35137 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Alx4O35137 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alx4O35137 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Alx4O35137 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alx4O35137 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alx4O35137 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alx4O35137 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alx4O35137 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alx4O35137 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Alx4O35137 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.37■□□□□ 0.21
Alx4O35137 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Alx4O35137 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alx4O35137 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Alx4O35137 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alx4O35137 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Alx4O35137 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.36■□□□□ 0.21
Alx4O35137 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Alx4O35137 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Alx4O35137 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Alx4O35137 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Alx4O35137 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Alx4O35137 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.36■□□□□ 0.21
Alx4O35137 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
Alx4O35137 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Alx4O35137 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Alx4O35137 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.36■□□□□ 0.21
Alx4O35137 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Alx4O35137 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Alx4O35137 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.36■□□□□ 0.21
Alx4O35137 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Alx4O35137 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Alx4O35137 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Alx4O35137 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Alx4O35137 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Alx4O35137 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Alx4O35137 Fst-202ENSMUST00000223640 2612 ntBASIC16.36■□□□□ 0.21
Alx4O35137 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Alx4O35137 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Alx4O35137 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Alx4O35137 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Alx4O35137 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.36■□□□□ 0.21
Alx4O35137 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Alx4O35137 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Alx4O35137 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Alx4O35137 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Alx4O35137 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.35■□□□□ 0.21
Alx4O35137 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Alx4O35137 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Alx4O35137 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.35■□□□□ 0.21
Alx4O35137 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Alx4O35137 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Alx4O35137 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Alx4O35137 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.35■□□□□ 0.21
Alx4O35137 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.35■□□□□ 0.21
Alx4O35137 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.35■□□□□ 0.21
Alx4O35137 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.35■□□□□ 0.21
Alx4O35137 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.35■□□□□ 0.21
Alx4O35137 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Alx4O35137 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Alx4O35137 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Alx4O35137 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Alx4O35137 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Alx4O35137 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Alx4O35137 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Alx4O35137 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Alx4O35137 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.35■□□□□ 0.21
Alx4O35137 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Alx4O35137 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Alx4O35137 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Alx4O35137 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Alx4O35137 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.35■□□□□ 0.21
Alx4O35137 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Alx4O35137 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Alx4O35137 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Alx4O35137 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Alx4O35137 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Alx4O35137 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.34■□□□□ 0.21
Alx4O35137 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.34■□□□□ 0.21
Alx4O35137 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Alx4O35137 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Alx4O35137 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
Alx4O35137 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms