Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trove2O08848 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.84■□□□□ 0.61
Trove2O08848 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trove2O08848 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trove2O08848 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trove2O08848 Gm12251-201ENSMUST00000117893 792 ntBASIC18.84■□□□□ 0.61
Trove2O08848 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Trove2O08848 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trove2O08848 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trove2O08848 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trove2O08848 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trove2O08848 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trove2O08848 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trove2O08848 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trove2O08848 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trove2O08848 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trove2O08848 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Trove2O08848 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trove2O08848 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trove2O08848 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trove2O08848 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trove2O08848 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trove2O08848 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trove2O08848 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trove2O08848 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trove2O08848 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trove2O08848 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trove2O08848 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trove2O08848 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Trove2O08848 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trove2O08848 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Trove2O08848 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.83■□□□□ 0.6
Trove2O08848 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Trove2O08848 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Trove2O08848 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Trove2O08848 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trove2O08848 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trove2O08848 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trove2O08848 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Trove2O08848 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trove2O08848 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trove2O08848 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trove2O08848 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trove2O08848 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trove2O08848 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.82■□□□□ 0.6
Trove2O08848 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trove2O08848 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trove2O08848 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trove2O08848 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trove2O08848 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trove2O08848 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trove2O08848 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trove2O08848 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trove2O08848 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trove2O08848 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trove2O08848 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trove2O08848 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.81■□□□□ 0.6
Trove2O08848 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.81■□□□□ 0.6
Trove2O08848 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trove2O08848 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trove2O08848 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trove2O08848 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trove2O08848 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Trove2O08848 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trove2O08848 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.81■□□□□ 0.6
Trove2O08848 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trove2O08848 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trove2O08848 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trove2O08848 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.8■□□□□ 0.6
Trove2O08848 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trove2O08848 Gm8493-201ENSMUST00000196881 489 ntBASIC18.8■□□□□ 0.6
Trove2O08848 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.8■□□□□ 0.6
Trove2O08848 Serp2-204ENSMUST00000228055 705 ntBASIC18.8■□□□□ 0.6
Trove2O08848 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trove2O08848 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trove2O08848 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.8■□□□□ 0.6
Trove2O08848 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trove2O08848 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trove2O08848 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trove2O08848 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trove2O08848 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trove2O08848 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trove2O08848 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.79■□□□□ 0.6
Trove2O08848 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trove2O08848 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trove2O08848 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trove2O08848 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trove2O08848 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trove2O08848 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trove2O08848 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.79■□□□□ 0.6
Trove2O08848 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.79■□□□□ 0.6
Trove2O08848 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trove2O08848 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trove2O08848 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trove2O08848 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trove2O08848 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trove2O08848 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trove2O08848 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.78■□□□□ 0.6
Trove2O08848 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trove2O08848 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms