Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ercc2O08811 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ercc2O08811 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ercc2O08811 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ercc2O08811 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.83■□□□□ 0.61
Ercc2O08811 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ercc2O08811 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ercc2O08811 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
Ercc2O08811 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.83■□□□□ 0.6
Ercc2O08811 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ercc2O08811 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ercc2O08811 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Ercc2O08811 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ercc2O08811 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ercc2O08811 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ercc2O08811 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Ercc2O08811 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ercc2O08811 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ercc2O08811 Gm6211-202ENSMUST00000167849 925 ntBASIC18.82■□□□□ 0.6
Ercc2O08811 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ercc2O08811 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ercc2O08811 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ercc2O08811 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ercc2O08811 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.81■□□□□ 0.6
Ercc2O08811 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ercc2O08811 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ercc2O08811 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ercc2O08811 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.81■□□□□ 0.6
Ercc2O08811 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ercc2O08811 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.81■□□□□ 0.6
Ercc2O08811 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ercc2O08811 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.81■□□□□ 0.6
Ercc2O08811 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.81■□□□□ 0.6
Ercc2O08811 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.81■□□□□ 0.6
Ercc2O08811 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.81■□□□□ 0.6
Ercc2O08811 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ercc2O08811 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ercc2O08811 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ercc2O08811 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ercc2O08811 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.8■□□□□ 0.6
Ercc2O08811 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ercc2O08811 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ercc2O08811 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Ercc2O08811 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Ercc2O08811 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ercc2O08811 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ercc2O08811 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.8■□□□□ 0.6
Ercc2O08811 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ercc2O08811 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ercc2O08811 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Ercc2O08811 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ercc2O08811 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ercc2O08811 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc2O08811 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc2O08811 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Ercc2O08811 Gm13148-201ENSMUST00000118892 745 ntBASIC18.79■□□□□ 0.6
Ercc2O08811 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc2O08811 Mir5133-201ENSMUST00000174955 77 ntBASIC18.79■□□□□ 0.6
Ercc2O08811 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc2O08811 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ercc2O08811 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc2O08811 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc2O08811 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc2O08811 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc2O08811 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.79■□□□□ 0.6
Ercc2O08811 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ercc2O08811 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ercc2O08811 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.78■□□□□ 0.6
Ercc2O08811 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.78■□□□□ 0.6
Ercc2O08811 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Ercc2O08811 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ercc2O08811 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ercc2O08811 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ercc2O08811 Gm12933-201ENSMUST00000120203 872 ntBASIC18.78■□□□□ 0.6
Ercc2O08811 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ercc2O08811 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ercc2O08811 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ercc2O08811 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ercc2O08811 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ercc2O08811 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ercc2O08811 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ercc2O08811 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ercc2O08811 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ercc2O08811 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ercc2O08811 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ercc2O08811 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ercc2O08811 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ercc2O08811 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ercc2O08811 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Ercc2O08811 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ercc2O08811 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Ercc2O08811 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ercc2O08811 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ercc2O08811 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.76■□□□□ 0.59
Ercc2O08811 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ercc2O08811 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.76■□□□□ 0.59
Ercc2O08811 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ercc2O08811 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ercc2O08811 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.76■□□□□ 0.59
Ercc2O08811 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms