Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Usp35M0QWN7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Usp35M0QWN7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp35M0QWN7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp35M0QWN7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp35M0QWN7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Usp35M0QWN7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp35M0QWN7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Usp35M0QWN7 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Usp35M0QWN7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp35M0QWN7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp35M0QWN7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp35M0QWN7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp35M0QWN7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Usp35M0QWN7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp35M0QWN7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp35M0QWN7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Usp35M0QWN7 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.65■□□□□ 0.74
Usp35M0QWN7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp35M0QWN7 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.65■□□□□ 0.74
Usp35M0QWN7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Usp35M0QWN7 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Usp35M0QWN7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp35M0QWN7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp35M0QWN7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp35M0QWN7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Usp35M0QWN7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Usp35M0QWN7 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp35M0QWN7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp35M0QWN7 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp35M0QWN7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.64■□□□□ 0.73
Usp35M0QWN7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.64■□□□□ 0.73
Usp35M0QWN7 Rab3c-203ENSMUST00000224180 967 ntBASIC19.64■□□□□ 0.73
Usp35M0QWN7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.64■□□□□ 0.73
Usp35M0QWN7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp35M0QWN7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.64■□□□□ 0.73
Usp35M0QWN7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp35M0QWN7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp35M0QWN7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp35M0QWN7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp35M0QWN7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp35M0QWN7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp35M0QWN7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Usp35M0QWN7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp35M0QWN7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp35M0QWN7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp35M0QWN7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.63■□□□□ 0.73
Usp35M0QWN7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp35M0QWN7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp35M0QWN7 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.63■□□□□ 0.73
Usp35M0QWN7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp35M0QWN7 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp35M0QWN7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp35M0QWN7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp35M0QWN7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp35M0QWN7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp35M0QWN7 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Usp35M0QWN7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp35M0QWN7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp35M0QWN7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp35M0QWN7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp35M0QWN7 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Usp35M0QWN7 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.62■□□□□ 0.73
Usp35M0QWN7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Usp35M0QWN7 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.62■□□□□ 0.73
Usp35M0QWN7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Usp35M0QWN7 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp35M0QWN7 Gm13168-201ENSMUST00000121771 632 ntBASIC19.62■□□□□ 0.73
Usp35M0QWN7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.62■□□□□ 0.73
Usp35M0QWN7 Gm37856-201ENSMUST00000191634 999 ntBASIC19.62■□□□□ 0.73
Usp35M0QWN7 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.62■□□□□ 0.73
Usp35M0QWN7 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp35M0QWN7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp35M0QWN7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp35M0QWN7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp35M0QWN7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp35M0QWN7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp35M0QWN7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp35M0QWN7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp35M0QWN7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp35M0QWN7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Usp35M0QWN7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp35M0QWN7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp35M0QWN7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp35M0QWN7 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Usp35M0QWN7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.61■□□□□ 0.73
Usp35M0QWN7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.61■□□□□ 0.73
Usp35M0QWN7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Usp35M0QWN7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp35M0QWN7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp35M0QWN7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Usp35M0QWN7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Usp35M0QWN7 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp35M0QWN7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp35M0QWN7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp35M0QWN7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp35M0QWN7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp35M0QWN7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp35M0QWN7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.61■□□□□ 0.73
Usp35M0QWN7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms