Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ube4aE9Q735 Krtap5-1-202ENSMUST00000188274 742 ntBASIC22.21■■□□□ 1.15
Ube4aE9Q735 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ube4aE9Q735 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Ube4aE9Q735 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC22.21■■□□□ 1.15
Ube4aE9Q735 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ube4aE9Q735 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Ube4aE9Q735 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
Ube4aE9Q735 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Ube4aE9Q735 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ube4aE9Q735 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ube4aE9Q735 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Ube4aE9Q735 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ube4aE9Q735 Gm15565-201ENSMUST00000118890 427 ntBASIC22.2■■□□□ 1.14
Ube4aE9Q735 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC22.2■■□□□ 1.14
Ube4aE9Q735 Mir5122-201ENSMUST00000175004 89 ntBASIC22.2■■□□□ 1.14
Ube4aE9Q735 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
Ube4aE9Q735 Gm43183-201ENSMUST00000200632 547 ntBASIC22.2■■□□□ 1.14
Ube4aE9Q735 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ube4aE9Q735 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ube4aE9Q735 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Ube4aE9Q735 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Ube4aE9Q735 Gm45560-201ENSMUST00000211492 1472 ntBASIC22.2■■□□□ 1.14
Ube4aE9Q735 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Ube4aE9Q735 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ube4aE9Q735 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ube4aE9Q735 Gm18025-201ENSMUST00000221733 862 ntBASIC22.19■■□□□ 1.14
Ube4aE9Q735 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ube4aE9Q735 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Ube4aE9Q735 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC22.19■■□□□ 1.14
Ube4aE9Q735 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ube4aE9Q735 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Ube4aE9Q735 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC22.19■■□□□ 1.14
Ube4aE9Q735 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC22.19■■□□□ 1.14
Ube4aE9Q735 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ube4aE9Q735 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Ube4aE9Q735 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ube4aE9Q735 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ube4aE9Q735 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ube4aE9Q735 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC22.18■■□□□ 1.14
Ube4aE9Q735 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC22.18■■□□□ 1.14
Ube4aE9Q735 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Ube4aE9Q735 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC22.18■■□□□ 1.14
Ube4aE9Q735 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC22.18■■□□□ 1.14
Ube4aE9Q735 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ube4aE9Q735 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ube4aE9Q735 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ube4aE9Q735 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ube4aE9Q735 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ube4aE9Q735 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ube4aE9Q735 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ube4aE9Q735 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC22.17■■□□□ 1.14
Ube4aE9Q735 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Ube4aE9Q735 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC22.17■■□□□ 1.14
Ube4aE9Q735 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Ube4aE9Q735 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ube4aE9Q735 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ube4aE9Q735 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC22.17■■□□□ 1.14
Ube4aE9Q735 Gm29994-201ENSMUST00000195495 1193 ntBASIC22.17■■□□□ 1.14
Ube4aE9Q735 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC22.17■■□□□ 1.14
Ube4aE9Q735 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ube4aE9Q735 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ube4aE9Q735 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ube4aE9Q735 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ube4aE9Q735 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Ube4aE9Q735 Gm15853-202ENSMUST00000195518 2041 ntBASIC22.16■■□□□ 1.14
Ube4aE9Q735 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Ube4aE9Q735 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ube4aE9Q735 Gm13836-201ENSMUST00000121159 501 ntBASIC22.16■■□□□ 1.14
Ube4aE9Q735 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC22.16■■□□□ 1.14
Ube4aE9Q735 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Ube4aE9Q735 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ube4aE9Q735 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Ube4aE9Q735 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ube4aE9Q735 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC22.16■■□□□ 1.14
Ube4aE9Q735 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ube4aE9Q735 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ube4aE9Q735 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ube4aE9Q735 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ube4aE9Q735 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ube4aE9Q735 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ube4aE9Q735 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC22.15■■□□□ 1.14
Ube4aE9Q735 Gm7977-201ENSMUST00000193787 748 ntBASIC22.15■■□□□ 1.14
Ube4aE9Q735 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ube4aE9Q735 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
Ube4aE9Q735 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC22.15■■□□□ 1.14
Ube4aE9Q735 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ube4aE9Q735 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC22.15■■□□□ 1.14
Ube4aE9Q735 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ube4aE9Q735 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ube4aE9Q735 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ube4aE9Q735 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ube4aE9Q735 Gm42545-201ENSMUST00000202755 922 ntBASIC22.14■■□□□ 1.13
Ube4aE9Q735 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Ube4aE9Q735 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ube4aE9Q735 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC22.14■■□□□ 1.13
Ube4aE9Q735 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Ube4aE9Q735 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ube4aE9Q735 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC22.13■■□□□ 1.13
Ube4aE9Q735 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC22.13■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms