Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh17E9PXF0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh17E9PXF0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.06■□□□□ 0.32
Pcdh17E9PXF0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh17E9PXF0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdh17E9PXF0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh17E9PXF0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
Pcdh17E9PXF0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh17E9PXF0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pcdh17E9PXF0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh17E9PXF0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh17E9PXF0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh17E9PXF0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh17E9PXF0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh17E9PXF0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh17E9PXF0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh17E9PXF0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh17E9PXF0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh17E9PXF0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh17E9PXF0 Golph3-205ENSMUST00000228671 2842 ntBASIC17.05■□□□□ 0.32
Pcdh17E9PXF0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh17E9PXF0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh17E9PXF0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh17E9PXF0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.05■□□□□ 0.32
Pcdh17E9PXF0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Pcdh17E9PXF0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh17E9PXF0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Pcdh17E9PXF0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh17E9PXF0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh17E9PXF0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pcdh17E9PXF0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh17E9PXF0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh17E9PXF0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh17E9PXF0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh17E9PXF0 Gm5643-201ENSMUST00000117081 966 ntBASIC17.04■□□□□ 0.32
Pcdh17E9PXF0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Pcdh17E9PXF0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh17E9PXF0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.04■□□□□ 0.32
Pcdh17E9PXF0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Pcdh17E9PXF0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdh17E9PXF0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh17E9PXF0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh17E9PXF0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh17E9PXF0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh17E9PXF0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh17E9PXF0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh17E9PXF0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
Pcdh17E9PXF0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Pcdh17E9PXF0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh17E9PXF0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh17E9PXF0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Pcdh17E9PXF0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh17E9PXF0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Pcdh17E9PXF0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh17E9PXF0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh17E9PXF0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh17E9PXF0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh17E9PXF0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh17E9PXF0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdh17E9PXF0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh17E9PXF0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh17E9PXF0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.02■□□□□ 0.32
Pcdh17E9PXF0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh17E9PXF0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh17E9PXF0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh17E9PXF0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdh17E9PXF0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdh17E9PXF0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdh17E9PXF0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh17E9PXF0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh17E9PXF0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh17E9PXF0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh17E9PXF0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh17E9PXF0 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.01■□□□□ 0.31
Pcdh17E9PXF0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh17E9PXF0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Pcdh17E9PXF0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh17E9PXF0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh17E9PXF0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh17E9PXF0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh17E9PXF0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh17E9PXF0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh17E9PXF0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh17E9PXF0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17■□□□□ 0.31
Pcdh17E9PXF0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh17E9PXF0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17■□□□□ 0.31
Pcdh17E9PXF0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdh17E9PXF0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh17E9PXF0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17■□□□□ 0.31
Pcdh17E9PXF0 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh17E9PXF0 Gm11249-201ENSMUST00000117071 859 ntBASIC17■□□□□ 0.31
Pcdh17E9PXF0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdh17E9PXF0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17■□□□□ 0.31
Pcdh17E9PXF0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh17E9PXF0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh17E9PXF0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh17E9PXF0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh17E9PXF0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh17E9PXF0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh17E9PXF0 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms