Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ptchd4B9EKX1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ptchd4B9EKX1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ptchd4B9EKX1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.81■□□□□ 0.76
Ptchd4B9EKX1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Ptchd4B9EKX1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ptchd4B9EKX1 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.81■□□□□ 0.76
Ptchd4B9EKX1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ptchd4B9EKX1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ptchd4B9EKX1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ptchd4B9EKX1 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.81■□□□□ 0.76
Ptchd4B9EKX1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptchd4B9EKX1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptchd4B9EKX1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ptchd4B9EKX1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.8■□□□□ 0.76
Ptchd4B9EKX1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Ptchd4B9EKX1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.8■□□□□ 0.76
Ptchd4B9EKX1 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptchd4B9EKX1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptchd4B9EKX1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptchd4B9EKX1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Ptchd4B9EKX1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptchd4B9EKX1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Ptchd4B9EKX1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Ptchd4B9EKX1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ptchd4B9EKX1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.8■□□□□ 0.76
Ptchd4B9EKX1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.8■□□□□ 0.76
Ptchd4B9EKX1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptchd4B9EKX1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptchd4B9EKX1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ptchd4B9EKX1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptchd4B9EKX1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.79■□□□□ 0.76
Ptchd4B9EKX1 Gm38285-201ENSMUST00000192928 922 ntBASIC19.79■□□□□ 0.76
Ptchd4B9EKX1 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ptchd4B9EKX1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptchd4B9EKX1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptchd4B9EKX1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptchd4B9EKX1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ptchd4B9EKX1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptchd4B9EKX1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ptchd4B9EKX1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptchd4B9EKX1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ptchd4B9EKX1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptchd4B9EKX1 Gm37055-201ENSMUST00000191866 133 ntBASIC19.78■□□□□ 0.76
Ptchd4B9EKX1 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.78■□□□□ 0.76
Ptchd4B9EKX1 Gm10138-203ENSMUST00000206952 366 ntBASIC19.78■□□□□ 0.76
Ptchd4B9EKX1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Ptchd4B9EKX1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptchd4B9EKX1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ptchd4B9EKX1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptchd4B9EKX1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptchd4B9EKX1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
Ptchd4B9EKX1 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ptchd4B9EKX1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ptchd4B9EKX1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ptchd4B9EKX1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Ptchd4B9EKX1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ptchd4B9EKX1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ptchd4B9EKX1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ptchd4B9EKX1 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.77■□□□□ 0.76
Ptchd4B9EKX1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.77■□□□□ 0.76
Ptchd4B9EKX1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ptchd4B9EKX1 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ptchd4B9EKX1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ptchd4B9EKX1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ptchd4B9EKX1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Ptchd4B9EKX1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ptchd4B9EKX1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ptchd4B9EKX1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ptchd4B9EKX1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ptchd4B9EKX1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ptchd4B9EKX1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ptchd4B9EKX1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ptchd4B9EKX1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ptchd4B9EKX1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Ptchd4B9EKX1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ptchd4B9EKX1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ptchd4B9EKX1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ptchd4B9EKX1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ptchd4B9EKX1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ptchd4B9EKX1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ptchd4B9EKX1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ptchd4B9EKX1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ptchd4B9EKX1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ptchd4B9EKX1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ptchd4B9EKX1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.75■□□□□ 0.75
Ptchd4B9EKX1 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ptchd4B9EKX1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Ptchd4B9EKX1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ptchd4B9EKX1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ptchd4B9EKX1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ptchd4B9EKX1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ptchd4B9EKX1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Ptchd4B9EKX1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.74■□□□□ 0.75
Ptchd4B9EKX1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Ptchd4B9EKX1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ptchd4B9EKX1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ptchd4B9EKX1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ptchd4B9EKX1 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ptchd4B9EKX1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms