Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Tubb1A2AQ07 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
Tubb1A2AQ07 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubb1A2AQ07 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tubb1A2AQ07 Fst-202ENSMUST00000223640 2612 ntBASIC18.87■□□□□ 0.61
Tubb1A2AQ07 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Tubb1A2AQ07 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tubb1A2AQ07 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tubb1A2AQ07 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tubb1A2AQ07 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tubb1A2AQ07 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tubb1A2AQ07 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tubb1A2AQ07 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tubb1A2AQ07 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tubb1A2AQ07 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Tubb1A2AQ07 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tubb1A2AQ07 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tubb1A2AQ07 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tubb1A2AQ07 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tubb1A2AQ07 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Tubb1A2AQ07 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.86■□□□□ 0.61
Tubb1A2AQ07 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tubb1A2AQ07 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.86■□□□□ 0.61
Tubb1A2AQ07 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tubb1A2AQ07 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tubb1A2AQ07 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.86■□□□□ 0.61
Tubb1A2AQ07 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tubb1A2AQ07 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tubb1A2AQ07 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.86■□□□□ 0.61
Tubb1A2AQ07 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.86■□□□□ 0.61
Tubb1A2AQ07 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.86■□□□□ 0.61
Tubb1A2AQ07 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tubb1A2AQ07 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tubb1A2AQ07 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tubb1A2AQ07 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tubb1A2AQ07 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Tubb1A2AQ07 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tubb1A2AQ07 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tubb1A2AQ07 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tubb1A2AQ07 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Tubb1A2AQ07 Gm10033-202ENSMUST00000211874 928 ntBASIC18.85■□□□□ 0.61
Tubb1A2AQ07 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.85■□□□□ 0.61
Tubb1A2AQ07 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tubb1A2AQ07 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tubb1A2AQ07 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Tubb1A2AQ07 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tubb1A2AQ07 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Tubb1A2AQ07 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.84■□□□□ 0.61
Tubb1A2AQ07 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubb1A2AQ07 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tubb1A2AQ07 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tubb1A2AQ07 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubb1A2AQ07 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.84■□□□□ 0.61
Tubb1A2AQ07 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.84■□□□□ 0.61
Tubb1A2AQ07 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubb1A2AQ07 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.84■□□□□ 0.61
Tubb1A2AQ07 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubb1A2AQ07 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubb1A2AQ07 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tubb1A2AQ07 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubb1A2AQ07 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubb1A2AQ07 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubb1A2AQ07 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubb1A2AQ07 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubb1A2AQ07 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Tubb1A2AQ07 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tubb1A2AQ07 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
Tubb1A2AQ07 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tubb1A2AQ07 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Tubb1A2AQ07 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tubb1A2AQ07 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tubb1A2AQ07 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tubb1A2AQ07 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.83■□□□□ 0.6
Tubb1A2AQ07 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tubb1A2AQ07 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tubb1A2AQ07 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.82■□□□□ 0.6
Tubb1A2AQ07 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubb1A2AQ07 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubb1A2AQ07 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tubb1A2AQ07 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.82■□□□□ 0.6
Tubb1A2AQ07 Gm6420-201ENSMUST00000193885 723 ntBASIC18.82■□□□□ 0.6
Tubb1A2AQ07 Gm42778-201ENSMUST00000199644 553 ntBASIC18.82■□□□□ 0.6
Tubb1A2AQ07 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubb1A2AQ07 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tubb1A2AQ07 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubb1A2AQ07 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubb1A2AQ07 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tubb1A2AQ07 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.81■□□□□ 0.6
Tubb1A2AQ07 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Tubb1A2AQ07 Nespas-201ENSMUST00000143738 1083 ntBASIC18.81■□□□□ 0.6
Tubb1A2AQ07 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.81■□□□□ 0.6
Tubb1A2AQ07 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubb1A2AQ07 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubb1A2AQ07 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubb1A2AQ07 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubb1A2AQ07 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubb1A2AQ07 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubb1A2AQ07 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubb1A2AQ07 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubb1A2AQ07 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms