Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12-1A0N8R1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12-1A0N8R1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12-1A0N8R1 Gm27454-201ENSMUST00000185090 204 ntBASIC15.36■□□□□ 0.05
Trav12-1A0N8R1 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.36■□□□□ 0.05
Trav12-1A0N8R1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav12-1A0N8R1 Gm40848-201ENSMUST00000221998 324 ntBASIC15.36■□□□□ 0.05
Trav12-1A0N8R1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12-1A0N8R1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.36■□□□□ 0.05
Trav12-1A0N8R1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12-1A0N8R1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12-1A0N8R1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12-1A0N8R1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12-1A0N8R1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12-1A0N8R1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12-1A0N8R1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12-1A0N8R1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12-1A0N8R1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12-1A0N8R1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12-1A0N8R1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12-1A0N8R1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav12-1A0N8R1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav12-1A0N8R1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12-1A0N8R1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12-1A0N8R1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.35■□□□□ 0.05
Trav12-1A0N8R1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.35■□□□□ 0.05
Trav12-1A0N8R1 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.35■□□□□ 0.05
Trav12-1A0N8R1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.35■□□□□ 0.05
Trav12-1A0N8R1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
Trav12-1A0N8R1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12-1A0N8R1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12-1A0N8R1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12-1A0N8R1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12-1A0N8R1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav12-1A0N8R1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav12-1A0N8R1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav12-1A0N8R1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12-1A0N8R1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12-1A0N8R1 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12-1A0N8R1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12-1A0N8R1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12-1A0N8R1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12-1A0N8R1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12-1A0N8R1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12-1A0N8R1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Trav12-1A0N8R1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12-1A0N8R1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.34■□□□□ 0.05
Trav12-1A0N8R1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12-1A0N8R1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12-1A0N8R1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12-1A0N8R1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12-1A0N8R1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12-1A0N8R1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12-1A0N8R1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12-1A0N8R1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12-1A0N8R1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav12-1A0N8R1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12-1A0N8R1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Trav12-1A0N8R1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav12-1A0N8R1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12-1A0N8R1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12-1A0N8R1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav12-1A0N8R1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Trav12-1A0N8R1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav12-1A0N8R1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.33■□□□□ 0.05
Trav12-1A0N8R1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12-1A0N8R1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12-1A0N8R1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12-1A0N8R1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12-1A0N8R1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12-1A0N8R1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC15.33■□□□□ 0.04
Trav12-1A0N8R1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12-1A0N8R1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12-1A0N8R1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12-1A0N8R1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12-1A0N8R1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav12-1A0N8R1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
Trav12-1A0N8R1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12-1A0N8R1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Trav12-1A0N8R1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav12-1A0N8R1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12-1A0N8R1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12-1A0N8R1 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.33■□□□□ 0.04
Trav12-1A0N8R1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav12-1A0N8R1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12-1A0N8R1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12-1A0N8R1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12-1A0N8R1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.32■□□□□ 0.04
Trav12-1A0N8R1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12-1A0N8R1 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.32■□□□□ 0.04
Trav12-1A0N8R1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12-1A0N8R1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12-1A0N8R1 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.32■□□□□ 0.04
Trav12-1A0N8R1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12-1A0N8R1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav12-1A0N8R1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12-1A0N8R1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12-1A0N8R1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12-1A0N8R1 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12-1A0N8R1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms