Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv17A0A140T8P8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trbv17A0A140T8P8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv17A0A140T8P8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv17A0A140T8P8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trbv17A0A140T8P8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trbv17A0A140T8P8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.15
Trbv17A0A140T8P8 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trbv17A0A140T8P8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trbv17A0A140T8P8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trbv17A0A140T8P8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv17A0A140T8P8 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trbv17A0A140T8P8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.08□□□□□ -0.16
Trbv17A0A140T8P8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv17A0A140T8P8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.08□□□□□ -0.16
Trbv17A0A140T8P8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.08□□□□□ -0.16
Trbv17A0A140T8P8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv17A0A140T8P8 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv17A0A140T8P8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv17A0A140T8P8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv17A0A140T8P8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Trbv17A0A140T8P8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv17A0A140T8P8 Golph3-205ENSMUST00000228671 2842 ntBASIC14.08□□□□□ -0.16
Trbv17A0A140T8P8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv17A0A140T8P8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv17A0A140T8P8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv17A0A140T8P8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv17A0A140T8P8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv17A0A140T8P8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv17A0A140T8P8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv17A0A140T8P8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv17A0A140T8P8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv17A0A140T8P8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trbv17A0A140T8P8 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv17A0A140T8P8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv17A0A140T8P8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv17A0A140T8P8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trbv17A0A140T8P8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv17A0A140T8P8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv17A0A140T8P8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trbv17A0A140T8P8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv17A0A140T8P8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv17A0A140T8P8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv17A0A140T8P8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv17A0A140T8P8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv17A0A140T8P8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv17A0A140T8P8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC14.06□□□□□ -0.16
Trbv17A0A140T8P8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv17A0A140T8P8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.06□□□□□ -0.16
Trbv17A0A140T8P8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv17A0A140T8P8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv17A0A140T8P8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv17A0A140T8P8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv17A0A140T8P8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trbv17A0A140T8P8 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.06□□□□□ -0.16
Trbv17A0A140T8P8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv17A0A140T8P8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv17A0A140T8P8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv17A0A140T8P8 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv17A0A140T8P8 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.06□□□□□ -0.16
Trbv17A0A140T8P8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Trbv17A0A140T8P8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trbv17A0A140T8P8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv17A0A140T8P8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv17A0A140T8P8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv17A0A140T8P8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv17A0A140T8P8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv17A0A140T8P8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trbv17A0A140T8P8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv17A0A140T8P8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
Trbv17A0A140T8P8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.05□□□□□ -0.16
Trbv17A0A140T8P8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv17A0A140T8P8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv17A0A140T8P8 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv17A0A140T8P8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv17A0A140T8P8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv17A0A140T8P8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv17A0A140T8P8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Trbv17A0A140T8P8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.05□□□□□ -0.16
Trbv17A0A140T8P8 Gm8495-201ENSMUST00000188740 694 ntBASIC14.05□□□□□ -0.16
Trbv17A0A140T8P8 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.05□□□□□ -0.16
Trbv17A0A140T8P8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
Trbv17A0A140T8P8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv17A0A140T8P8 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.05□□□□□ -0.16
Trbv17A0A140T8P8 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv17A0A140T8P8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Trbv17A0A140T8P8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv17A0A140T8P8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Trbv17A0A140T8P8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trbv17A0A140T8P8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv17A0A140T8P8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv17A0A140T8P8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv17A0A140T8P8 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.04□□□□□ -0.16
Trbv17A0A140T8P8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv17A0A140T8P8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv17A0A140T8P8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv17A0A140T8P8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv17A0A140T8P8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv17A0A140T8P8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv17A0A140T8P8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms