Protein–RNA interactions for Protein: A0A140T8K2

Rpl13a-ps1, Ribosomal protein 13A, pseudogene 1, mousemouse

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13a-ps1A0A140T8K2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.38■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.38■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.38■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.37■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.37■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.37■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Gm12896-201ENSMUST00000118430 226 ntBASIC15.36■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.36■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.36■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.36■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.36■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.36■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.35■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.35■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Gm6576-201ENSMUST00000169678 883 ntBASIC15.35■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.35■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.34■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Gm22325-201ENSMUST00000158904 308 ntBASIC15.34■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Gm27275-201ENSMUST00000184318 272 ntBASIC15.34■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.34■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rpl13a-ps1A0A140T8K2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpl13a-ps1A0A140T8K2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms