Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-4A0A0G2JG37 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-4A0A0G2JG37 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-4A0A0G2JG37 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-4A0A0G2JG37 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-4A0A0G2JG37 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-4A0A0G2JG37 Gm15546-201ENSMUST00000122095 826 ntBASIC12.64□□□□□ -0.39
Trav9d-4A0A0G2JG37 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-4A0A0G2JG37 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC12.64□□□□□ -0.39
Trav9d-4A0A0G2JG37 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav9d-4A0A0G2JG37 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav9d-4A0A0G2JG37 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-4A0A0G2JG37 Gm6085-201ENSMUST00000182774 1470 ntBASIC12.64□□□□□ -0.39
Trav9d-4A0A0G2JG37 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-4A0A0G2JG37 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-4A0A0G2JG37 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-4A0A0G2JG37 AC123834.2-201ENSMUST00000224038 2340 ntBASIC12.63□□□□□ -0.39
Trav9d-4A0A0G2JG37 Gm37811-201ENSMUST00000192416 2601 ntBASIC12.63□□□□□ -0.39
Trav9d-4A0A0G2JG37 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-4A0A0G2JG37 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav9d-4A0A0G2JG37 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-4A0A0G2JG37 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-4A0A0G2JG37 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Trav9d-4A0A0G2JG37 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-4A0A0G2JG37 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-4A0A0G2JG37 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-4A0A0G2JG37 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-4A0A0G2JG37 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-4A0A0G2JG37 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-4A0A0G2JG37 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-4A0A0G2JG37 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav9d-4A0A0G2JG37 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-4A0A0G2JG37 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-4A0A0G2JG37 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav9d-4A0A0G2JG37 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Trav9d-4A0A0G2JG37 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav9d-4A0A0G2JG37 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav9d-4A0A0G2JG37 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav9d-4A0A0G2JG37 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav9d-4A0A0G2JG37 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-4A0A0G2JG37 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-4A0A0G2JG37 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-4A0A0G2JG37 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
Trav9d-4A0A0G2JG37 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
Trav9d-4A0A0G2JG37 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav9d-4A0A0G2JG37 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-4A0A0G2JG37 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-4A0A0G2JG37 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-4A0A0G2JG37 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-4A0A0G2JG37 Gm42911-201ENSMUST00000199360 1630 ntBASIC12.62□□□□□ -0.39
Trav9d-4A0A0G2JG37 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-4A0A0G2JG37 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav9d-4A0A0G2JG37 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-4A0A0G2JG37 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-4A0A0G2JG37 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-4A0A0G2JG37 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-4A0A0G2JG37 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-4A0A0G2JG37 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-4A0A0G2JG37 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trav9d-4A0A0G2JG37 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav9d-4A0A0G2JG37 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Trav9d-4A0A0G2JG37 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-4A0A0G2JG37 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-4A0A0G2JG37 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-4A0A0G2JG37 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-4A0A0G2JG37 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-4A0A0G2JG37 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-4A0A0G2JG37 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-4A0A0G2JG37 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-4A0A0G2JG37 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-4A0A0G2JG37 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-4A0A0G2JG37 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav9d-4A0A0G2JG37 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-4A0A0G2JG37 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav9d-4A0A0G2JG37 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-4A0A0G2JG37 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-4A0A0G2JG37 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-4A0A0G2JG37 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9d-4A0A0G2JG37 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9d-4A0A0G2JG37 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9d-4A0A0G2JG37 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9d-4A0A0G2JG37 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav9d-4A0A0G2JG37 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav9d-4A0A0G2JG37 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9d-4A0A0G2JG37 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav9d-4A0A0G2JG37 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav9d-4A0A0G2JG37 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9d-4A0A0G2JG37 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9d-4A0A0G2JG37 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC12.6□□□□□ -0.39
Trav9d-4A0A0G2JG37 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav9d-4A0A0G2JG37 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9d-4A0A0G2JG37 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9d-4A0A0G2JG37 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav9d-4A0A0G2JG37 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9d-4A0A0G2JG37 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9d-4A0A0G2JG37 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav9d-4A0A0G2JG37 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9d-4A0A0G2JG37 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9d-4A0A0G2JG37 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9d-4A0A0G2JG37 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 243.2 ms