Protein–RNA interactions for Protein: A0A0G2JFC6

Igkv4-53, Immunoglobulin kappa variable 4-53 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-53A0A0G2JFC6 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igkv4-53A0A0G2JFC6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Igkv4-53A0A0G2JFC6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Igkv4-53A0A0G2JFC6 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Igkv4-53A0A0G2JFC6 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Igkv4-53A0A0G2JFC6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Igkv4-53A0A0G2JFC6 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Igkv4-53A0A0G2JFC6 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Igkv4-53A0A0G2JFC6 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Igkv4-53A0A0G2JFC6 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Igkv4-53A0A0G2JFC6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC13.02□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Gm38205-201ENSMUST00000192243 258 ntBASIC13.02□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC13.02□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.02□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv4-53A0A0G2JFC6 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC13.01□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv4-53A0A0G2JFC6 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.01□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv4-53A0A0G2JFC6 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC13□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC13□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC13□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC13□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC13□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC13□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC13□□□□□ -0.33
Igkv4-53A0A0G2JFC6 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC13□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC13□□□□□ -0.33
Igkv4-53A0A0G2JFC6 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC13□□□□□ -0.33
Igkv4-53A0A0G2JFC6 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC13□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13□□□□□ -0.33
Igkv4-53A0A0G2JFC6 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv4-53A0A0G2JFC6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv4-53A0A0G2JFC6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC12.99□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC12.99□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC12.99□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv4-53A0A0G2JFC6 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms