Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-2A0A0G2JF93 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-2A0A0G2JF93 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-2A0A0G2JF93 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-2A0A0G2JF93 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-2A0A0G2JF93 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-2A0A0G2JF93 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-2A0A0G2JF93 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav13n-2A0A0G2JF93 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav13n-2A0A0G2JF93 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav13n-2A0A0G2JF93 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-2A0A0G2JF93 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-2A0A0G2JF93 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-2A0A0G2JF93 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-2A0A0G2JF93 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav13n-2A0A0G2JF93 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav13n-2A0A0G2JF93 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-2A0A0G2JF93 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-2A0A0G2JF93 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-2A0A0G2JF93 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-2A0A0G2JF93 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-2A0A0G2JF93 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav13n-2A0A0G2JF93 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-2A0A0G2JF93 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav13n-2A0A0G2JF93 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-2A0A0G2JF93 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-2A0A0G2JF93 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav13n-2A0A0G2JF93 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-2A0A0G2JF93 Gm45444-201ENSMUST00000211394 898 ntBASIC12.19□□□□□ -0.46
Trav13n-2A0A0G2JF93 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-2A0A0G2JF93 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-2A0A0G2JF93 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav13n-2A0A0G2JF93 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-2A0A0G2JF93 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-2A0A0G2JF93 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav13n-2A0A0G2JF93 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-2A0A0G2JF93 Gm32699-201ENSMUST00000221728 1988 ntBASIC12.19□□□□□ -0.46
Trav13n-2A0A0G2JF93 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-2A0A0G2JF93 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-2A0A0G2JF93 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-2A0A0G2JF93 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-2A0A0G2JF93 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-2A0A0G2JF93 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav13n-2A0A0G2JF93 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-2A0A0G2JF93 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-2A0A0G2JF93 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-2A0A0G2JF93 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-2A0A0G2JF93 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-2A0A0G2JF93 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-2A0A0G2JF93 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav13n-2A0A0G2JF93 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-2A0A0G2JF93 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-2A0A0G2JF93 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-2A0A0G2JF93 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-2A0A0G2JF93 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC12.18□□□□□ -0.46
Trav13n-2A0A0G2JF93 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav13n-2A0A0G2JF93 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-2A0A0G2JF93 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-2A0A0G2JF93 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-2A0A0G2JF93 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-2A0A0G2JF93 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-2A0A0G2JF93 Gm10571-201ENSMUST00000097869 1638 ntBASIC12.18□□□□□ -0.46
Trav13n-2A0A0G2JF93 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-2A0A0G2JF93 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Trav13n-2A0A0G2JF93 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav13n-2A0A0G2JF93 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav13n-2A0A0G2JF93 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-2A0A0G2JF93 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-2A0A0G2JF93 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Trav13n-2A0A0G2JF93 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13n-2A0A0G2JF93 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13n-2A0A0G2JF93 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Trav13n-2A0A0G2JF93 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13n-2A0A0G2JF93 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13n-2A0A0G2JF93 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13n-2A0A0G2JF93 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13n-2A0A0G2JF93 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13n-2A0A0G2JF93 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav13n-2A0A0G2JF93 Etf1-202ENSMUST00000180351 108 ntBASIC12.17□□□□□ -0.46
Trav13n-2A0A0G2JF93 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC12.17□□□□□ -0.46
Trav13n-2A0A0G2JF93 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13n-2A0A0G2JF93 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13n-2A0A0G2JF93 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13n-2A0A0G2JF93 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Trav13n-2A0A0G2JF93 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13n-2A0A0G2JF93 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13n-2A0A0G2JF93 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13n-2A0A0G2JF93 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms