Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-1A0A0G2JEU8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-1A0A0G2JEU8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.29□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.29□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Gm32699-201ENSMUST00000221728 1988 ntBASIC13.29□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.28□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav13n-1A0A0G2JEU8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.28□□□□□ -0.28
Trav13n-1A0A0G2JEU8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.27□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Gm6211-202ENSMUST00000167849 925 ntBASIC13.27□□□□□ -0.29
Trav13n-1A0A0G2JEU8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Gm27011-201ENSMUST00000182352 972 ntBASIC13.27□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.27□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Gm38342-201ENSMUST00000195710 2980 ntBASIC13.26□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Trav13n-1A0A0G2JEU8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav13n-1A0A0G2JEU8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC13.26□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms