Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3n-3A0A0G2JEM0 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.91□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.9□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC13.9□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3n-3A0A0G2JEM0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3n-3A0A0G2JEM0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC13.9□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
Trav3n-3A0A0G2JEM0 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.89□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3n-3A0A0G2JEM0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC13.89□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav3n-3A0A0G2JEM0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Gm5812-201ENSMUST00000061073 957 ntBASIC13.89□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.88□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Gm6085-201ENSMUST00000182774 1470 ntBASIC13.88□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Gm43672-201ENSMUST00000199072 1731 ntBASIC13.88□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav3n-3A0A0G2JEM0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3n-3A0A0G2JEM0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3n-3A0A0G2JEM0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC13.87□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Gm15546-201ENSMUST00000122095 826 ntBASIC13.87□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms