Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav11A0A0B4J1J9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav11A0A0B4J1J9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC12.65□□□□□ -0.38
Trav11A0A0B4J1J9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav11A0A0B4J1J9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav11A0A0B4J1J9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav11A0A0B4J1J9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav11A0A0B4J1J9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC12.65□□□□□ -0.38
Trav11A0A0B4J1J9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav11A0A0B4J1J9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav11A0A0B4J1J9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav11A0A0B4J1J9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav11A0A0B4J1J9 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav11A0A0B4J1J9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav11A0A0B4J1J9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav11A0A0B4J1J9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav11A0A0B4J1J9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trav11A0A0B4J1J9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav11A0A0B4J1J9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Trav11A0A0B4J1J9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav11A0A0B4J1J9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav11A0A0B4J1J9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav11A0A0B4J1J9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav11A0A0B4J1J9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav11A0A0B4J1J9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav11A0A0B4J1J9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav11A0A0B4J1J9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav11A0A0B4J1J9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav11A0A0B4J1J9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav11A0A0B4J1J9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav11A0A0B4J1J9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav11A0A0B4J1J9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav11A0A0B4J1J9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav11A0A0B4J1J9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav11A0A0B4J1J9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav11A0A0B4J1J9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav11A0A0B4J1J9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav11A0A0B4J1J9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav11A0A0B4J1J9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav11A0A0B4J1J9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav11A0A0B4J1J9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav11A0A0B4J1J9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav11A0A0B4J1J9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav11A0A0B4J1J9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav11A0A0B4J1J9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav11A0A0B4J1J9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav11A0A0B4J1J9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav11A0A0B4J1J9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav11A0A0B4J1J9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav11A0A0B4J1J9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Trav11A0A0B4J1J9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav11A0A0B4J1J9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav11A0A0B4J1J9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav11A0A0B4J1J9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav11A0A0B4J1J9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav11A0A0B4J1J9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav11A0A0B4J1J9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Trav11A0A0B4J1J9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav11A0A0B4J1J9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav11A0A0B4J1J9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav11A0A0B4J1J9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav11A0A0B4J1J9 AC093043.1-201ENSMUST00000226700 898 ntBASIC12.62□□□□□ -0.39
Trav11A0A0B4J1J9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav11A0A0B4J1J9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav11A0A0B4J1J9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
Trav11A0A0B4J1J9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC12.62□□□□□ -0.39
Trav11A0A0B4J1J9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav11A0A0B4J1J9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav11A0A0B4J1J9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC12.62□□□□□ -0.39
Trav11A0A0B4J1J9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav11A0A0B4J1J9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav11A0A0B4J1J9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav11A0A0B4J1J9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav11A0A0B4J1J9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav11A0A0B4J1J9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav11A0A0B4J1J9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav11A0A0B4J1J9 Gm42922-201ENSMUST00000195887 2078 ntBASIC12.61□□□□□ -0.39
Trav11A0A0B4J1J9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav11A0A0B4J1J9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav11A0A0B4J1J9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav11A0A0B4J1J9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav11A0A0B4J1J9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav11A0A0B4J1J9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav11A0A0B4J1J9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav11A0A0B4J1J9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC12.61□□□□□ -0.39
Trav11A0A0B4J1J9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav11A0A0B4J1J9 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav11A0A0B4J1J9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav11A0A0B4J1J9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav11A0A0B4J1J9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav11A0A0B4J1J9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Trav11A0A0B4J1J9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav11A0A0B4J1J9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav11A0A0B4J1J9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav11A0A0B4J1J9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav11A0A0B4J1J9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav11A0A0B4J1J9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav11A0A0B4J1J9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms