Protein–RNA interactions for Protein: A0A0B4J1J5

Ighv9-3, Immunoglobulin heavy variable V9-3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv9-3A0A0B4J1J5 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv9-3A0A0B4J1J5 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.29■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.29■□□□□ 0.04
Ighv9-3A0A0B4J1J5 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.29■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.28■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.28■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.28■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv9-3A0A0B4J1J5 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.28■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv9-3A0A0B4J1J5 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.26■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv9-3A0A0B4J1J5 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv9-3A0A0B4J1J5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.26■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.26■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.26■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Gm12441-201ENSMUST00000121806 588 ntBASIC15.25■□□□□ 0.03
Ighv9-3A0A0B4J1J5 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.25■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Gm4968-201ENSMUST00000071458 858 ntBASIC15.25■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv9-3A0A0B4J1J5 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.25■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.24■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.24■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.24■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms