Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Trbv16A0A0B4J1H3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv16A0A0B4J1H3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv16A0A0B4J1H3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv16A0A0B4J1H3 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.34□□□□□ -0.27
Trbv16A0A0B4J1H3 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv16A0A0B4J1H3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv16A0A0B4J1H3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trbv16A0A0B4J1H3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv16A0A0B4J1H3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv16A0A0B4J1H3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv16A0A0B4J1H3 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv16A0A0B4J1H3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv16A0A0B4J1H3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trbv16A0A0B4J1H3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv16A0A0B4J1H3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv16A0A0B4J1H3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC13.33□□□□□ -0.28
Trbv16A0A0B4J1H3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Trbv16A0A0B4J1H3 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.33□□□□□ -0.28
Trbv16A0A0B4J1H3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trbv16A0A0B4J1H3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv16A0A0B4J1H3 Gm45606-201ENSMUST00000209836 2795 ntBASIC13.33□□□□□ -0.28
Trbv16A0A0B4J1H3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv16A0A0B4J1H3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv16A0A0B4J1H3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC13.33□□□□□ -0.28
Trbv16A0A0B4J1H3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trbv16A0A0B4J1H3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv16A0A0B4J1H3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv16A0A0B4J1H3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Trbv16A0A0B4J1H3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trbv16A0A0B4J1H3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv16A0A0B4J1H3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trbv16A0A0B4J1H3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv16A0A0B4J1H3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv16A0A0B4J1H3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv16A0A0B4J1H3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trbv16A0A0B4J1H3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv16A0A0B4J1H3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv16A0A0B4J1H3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC13.32□□□□□ -0.28
Trbv16A0A0B4J1H3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv16A0A0B4J1H3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv16A0A0B4J1H3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv16A0A0B4J1H3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv16A0A0B4J1H3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv16A0A0B4J1H3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv16A0A0B4J1H3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv16A0A0B4J1H3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Trbv16A0A0B4J1H3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trbv16A0A0B4J1H3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv16A0A0B4J1H3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv16A0A0B4J1H3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv16A0A0B4J1H3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv16A0A0B4J1H3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv16A0A0B4J1H3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Trbv16A0A0B4J1H3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv16A0A0B4J1H3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv16A0A0B4J1H3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv16A0A0B4J1H3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv16A0A0B4J1H3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv16A0A0B4J1H3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv16A0A0B4J1H3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv16A0A0B4J1H3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv16A0A0B4J1H3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv16A0A0B4J1H3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC13.3□□□□□ -0.28
Trbv16A0A0B4J1H3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv16A0A0B4J1H3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Trbv16A0A0B4J1H3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trbv16A0A0B4J1H3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv16A0A0B4J1H3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv16A0A0B4J1H3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv16A0A0B4J1H3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv16A0A0B4J1H3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv16A0A0B4J1H3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv16A0A0B4J1H3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv16A0A0B4J1H3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv16A0A0B4J1H3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv16A0A0B4J1H3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Gm14281-201ENSMUST00000121700 1294 ntBASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms