Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-5A0A075B6B9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-5A0A075B6B9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-5A0A075B6B9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-5A0A075B6B9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav6d-5A0A075B6B9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Trav6d-5A0A075B6B9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-5A0A075B6B9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Trav6d-5A0A075B6B9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Trav6d-5A0A075B6B9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-5A0A075B6B9 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.86□□□□□ -0.03
Trav6d-5A0A075B6B9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-5A0A075B6B9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav6d-5A0A075B6B9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC14.86□□□□□ -0.03
Trav6d-5A0A075B6B9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-5A0A075B6B9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-5A0A075B6B9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-5A0A075B6B9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-5A0A075B6B9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-5A0A075B6B9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-5A0A075B6B9 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.85□□□□□ -0.03
Trav6d-5A0A075B6B9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-5A0A075B6B9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-5A0A075B6B9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-5A0A075B6B9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-5A0A075B6B9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-5A0A075B6B9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.85□□□□□ -0.03
Trav6d-5A0A075B6B9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-5A0A075B6B9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-5A0A075B6B9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav6d-5A0A075B6B9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-5A0A075B6B9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav6d-5A0A075B6B9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-5A0A075B6B9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-5A0A075B6B9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-5A0A075B6B9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-5A0A075B6B9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-5A0A075B6B9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-5A0A075B6B9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-5A0A075B6B9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-5A0A075B6B9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-5A0A075B6B9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav6d-5A0A075B6B9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-5A0A075B6B9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-5A0A075B6B9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-5A0A075B6B9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-5A0A075B6B9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Trav6d-5A0A075B6B9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-5A0A075B6B9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-5A0A075B6B9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.84□□□□□ -0.03
Trav6d-5A0A075B6B9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-5A0A075B6B9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-5A0A075B6B9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav6d-5A0A075B6B9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC14.84□□□□□ -0.03
Trav6d-5A0A075B6B9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-5A0A075B6B9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav6d-5A0A075B6B9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-5A0A075B6B9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-5A0A075B6B9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav6d-5A0A075B6B9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-5A0A075B6B9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav6d-5A0A075B6B9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-5A0A075B6B9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-5A0A075B6B9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav6d-5A0A075B6B9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-5A0A075B6B9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-5A0A075B6B9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-5A0A075B6B9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-5A0A075B6B9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-5A0A075B6B9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-5A0A075B6B9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-5A0A075B6B9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-5A0A075B6B9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-5A0A075B6B9 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.83□□□□□ -0.04
Trav6d-5A0A075B6B9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-5A0A075B6B9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav6d-5A0A075B6B9 Golgb1-201ENSMUST00000023534 498 ntBASIC14.83□□□□□ -0.04
Trav6d-5A0A075B6B9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-5A0A075B6B9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-5A0A075B6B9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-5A0A075B6B9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-5A0A075B6B9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-5A0A075B6B9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-5A0A075B6B9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-5A0A075B6B9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-5A0A075B6B9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-5A0A075B6B9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav6d-5A0A075B6B9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-5A0A075B6B9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-5A0A075B6B9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-5A0A075B6B9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-5A0A075B6B9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-5A0A075B6B9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-5A0A075B6B9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-5A0A075B6B9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav6d-5A0A075B6B9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.82□□□□□ -0.04
Trav6d-5A0A075B6B9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-5A0A075B6B9 Spcs1-204ENSMUST00000226782 949 ntBASIC14.82□□□□□ -0.04
Trav6d-5A0A075B6B9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-5A0A075B6B9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms