Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-4A0A075B6B4 Golph3-205ENSMUST00000228671 2842 ntBASIC14.19□□□□□ -0.14
Trav6-4A0A075B6B4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav6-4A0A075B6B4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav6-4A0A075B6B4 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-4A0A075B6B4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-4A0A075B6B4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav6-4A0A075B6B4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav6-4A0A075B6B4 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-4A0A075B6B4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav6-4A0A075B6B4 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-4A0A075B6B4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav6-4A0A075B6B4 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-4A0A075B6B4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-4A0A075B6B4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-4A0A075B6B4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-4A0A075B6B4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.18□□□□□ -0.14
Trav6-4A0A075B6B4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-4A0A075B6B4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-4A0A075B6B4 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.18□□□□□ -0.14
Trav6-4A0A075B6B4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-4A0A075B6B4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-4A0A075B6B4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-4A0A075B6B4 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav6-4A0A075B6B4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-4A0A075B6B4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav6-4A0A075B6B4 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-4A0A075B6B4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-4A0A075B6B4 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-4A0A075B6B4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-4A0A075B6B4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-4A0A075B6B4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.17□□□□□ -0.14
Trav6-4A0A075B6B4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.17□□□□□ -0.14
Trav6-4A0A075B6B4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.17□□□□□ -0.14
Trav6-4A0A075B6B4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.17□□□□□ -0.14
Trav6-4A0A075B6B4 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav6-4A0A075B6B4 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.17□□□□□ -0.14
Trav6-4A0A075B6B4 Gm6365-201ENSMUST00000054711 744 ntBASIC14.17□□□□□ -0.14
Trav6-4A0A075B6B4 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-4A0A075B6B4 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-4A0A075B6B4 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Trav6-4A0A075B6B4 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-4A0A075B6B4 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-4A0A075B6B4 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.17□□□□□ -0.14
Trav6-4A0A075B6B4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-4A0A075B6B4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.17□□□□□ -0.14
Trav6-4A0A075B6B4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-4A0A075B6B4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-4A0A075B6B4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-4A0A075B6B4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-4A0A075B6B4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-4A0A075B6B4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC14.16□□□□□ -0.14
Trav6-4A0A075B6B4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-4A0A075B6B4 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.16□□□□□ -0.14
Trav6-4A0A075B6B4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-4A0A075B6B4 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-4A0A075B6B4 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav6-4A0A075B6B4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-4A0A075B6B4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-4A0A075B6B4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-4A0A075B6B4 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-4A0A075B6B4 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-4A0A075B6B4 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-4A0A075B6B4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-4A0A075B6B4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav6-4A0A075B6B4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.15□□□□□ -0.14
Trav6-4A0A075B6B4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Trav6-4A0A075B6B4 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.15□□□□□ -0.14
Trav6-4A0A075B6B4 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-4A0A075B6B4 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-4A0A075B6B4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-4A0A075B6B4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav6-4A0A075B6B4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-4A0A075B6B4 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-4A0A075B6B4 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav6-4A0A075B6B4 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-4A0A075B6B4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-4A0A075B6B4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav6-4A0A075B6B4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trav6-4A0A075B6B4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-4A0A075B6B4 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav6-4A0A075B6B4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav6-4A0A075B6B4 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-4A0A075B6B4 Gm7290-201ENSMUST00000104990 617 ntBASIC14.14□□□□□ -0.15
Trav6-4A0A075B6B4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-4A0A075B6B4 Gm12918-201ENSMUST00000120234 636 ntBASIC14.14□□□□□ -0.15
Trav6-4A0A075B6B4 Gm15710-201ENSMUST00000121821 636 ntBASIC14.14□□□□□ -0.15
Trav6-4A0A075B6B4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-4A0A075B6B4 Gm5075-201ENSMUST00000196916 622 ntBASIC14.14□□□□□ -0.15
Trav6-4A0A075B6B4 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.14□□□□□ -0.15
Trav6-4A0A075B6B4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav6-4A0A075B6B4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.14□□□□□ -0.15
Trav6-4A0A075B6B4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.14□□□□□ -0.15
Trav6-4A0A075B6B4 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-4A0A075B6B4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-4A0A075B6B4 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-4A0A075B6B4 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-4A0A075B6B4 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-4A0A075B6B4 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-4A0A075B6B4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms