Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12d-3A0A075B6A4 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav12d-3A0A075B6A4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav12d-3A0A075B6A4 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12d-3A0A075B6A4 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12d-3A0A075B6A4 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12d-3A0A075B6A4 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12d-3A0A075B6A4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12d-3A0A075B6A4 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12d-3A0A075B6A4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
Trav12d-3A0A075B6A4 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12d-3A0A075B6A4 Gm6085-201ENSMUST00000182774 1470 ntBASIC13.76□□□□□ -0.21
Trav12d-3A0A075B6A4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trav12d-3A0A075B6A4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12d-3A0A075B6A4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12d-3A0A075B6A4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav12d-3A0A075B6A4 Gm27502-201ENSMUST00000183495 199 ntBASIC13.76□□□□□ -0.21
Trav12d-3A0A075B6A4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Trav12d-3A0A075B6A4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Trav12d-3A0A075B6A4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12d-3A0A075B6A4 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12d-3A0A075B6A4 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Trav12d-3A0A075B6A4 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav12d-3A0A075B6A4 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav12d-3A0A075B6A4 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav12d-3A0A075B6A4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12d-3A0A075B6A4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12d-3A0A075B6A4 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12d-3A0A075B6A4 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12d-3A0A075B6A4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12d-3A0A075B6A4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav12d-3A0A075B6A4 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12d-3A0A075B6A4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12d-3A0A075B6A4 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12d-3A0A075B6A4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12d-3A0A075B6A4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12d-3A0A075B6A4 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12d-3A0A075B6A4 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12d-3A0A075B6A4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12d-3A0A075B6A4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC13.74□□□□□ -0.21
Trav12d-3A0A075B6A4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12d-3A0A075B6A4 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
Trav12d-3A0A075B6A4 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav12d-3A0A075B6A4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav12d-3A0A075B6A4 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12d-3A0A075B6A4 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC13.74□□□□□ -0.21
Trav12d-3A0A075B6A4 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav12d-3A0A075B6A4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12d-3A0A075B6A4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12d-3A0A075B6A4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12d-3A0A075B6A4 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12d-3A0A075B6A4 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12d-3A0A075B6A4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Trav12d-3A0A075B6A4 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12d-3A0A075B6A4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12d-3A0A075B6A4 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav12d-3A0A075B6A4 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav12d-3A0A075B6A4 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Trav12d-3A0A075B6A4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC13.73□□□□□ -0.21
Trav12d-3A0A075B6A4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav12d-3A0A075B6A4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav12d-3A0A075B6A4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav12d-3A0A075B6A4 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav12d-3A0A075B6A4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav12d-3A0A075B6A4 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav12d-3A0A075B6A4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav12d-3A0A075B6A4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav12d-3A0A075B6A4 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.72□□□□□ -0.21
Trav12d-3A0A075B6A4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav12d-3A0A075B6A4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav12d-3A0A075B6A4 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.72□□□□□ -0.21
Trav12d-3A0A075B6A4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav12d-3A0A075B6A4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav12d-3A0A075B6A4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav12d-3A0A075B6A4 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav12d-3A0A075B6A4 Gm7332-201ENSMUST00000118351 454 ntBASIC13.72□□□□□ -0.21
Trav12d-3A0A075B6A4 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav12d-3A0A075B6A4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC13.72□□□□□ -0.21
Trav12d-3A0A075B6A4 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav12d-3A0A075B6A4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav12d-3A0A075B6A4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav12d-3A0A075B6A4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav12d-3A0A075B6A4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav12d-3A0A075B6A4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.72□□□□□ -0.21
Trav12d-3A0A075B6A4 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav12d-3A0A075B6A4 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav12d-3A0A075B6A4 Gm42911-201ENSMUST00000199360 1630 ntBASIC13.72□□□□□ -0.21
Trav12d-3A0A075B6A4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trav12d-3A0A075B6A4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav12d-3A0A075B6A4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav12d-3A0A075B6A4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav12d-3A0A075B6A4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav12d-3A0A075B6A4 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav12d-3A0A075B6A4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trav12d-3A0A075B6A4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC13.71□□□□□ -0.21
Trav12d-3A0A075B6A4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav12d-3A0A075B6A4 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav12d-3A0A075B6A4 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav12d-3A0A075B6A4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav12d-3A0A075B6A4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms