Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6-7-dv9A0A075B639 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav6-7-dv9A0A075B639 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6-7-dv9A0A075B639 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6-7-dv9A0A075B639 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.33■□□□□ 0.2
Trav6-7-dv9A0A075B639 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.33■□□□□ 0.2
Trav6-7-dv9A0A075B639 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.33■□□□□ 0.2
Trav6-7-dv9A0A075B639 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.33■□□□□ 0.2
Trav6-7-dv9A0A075B639 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6-7-dv9A0A075B639 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6-7-dv9A0A075B639 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.33■□□□□ 0.2
Trav6-7-dv9A0A075B639 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6-7-dv9A0A075B639 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6-7-dv9A0A075B639 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6-7-dv9A0A075B639 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6-7-dv9A0A075B639 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6-7-dv9A0A075B639 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6-7-dv9A0A075B639 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Trav6-7-dv9A0A075B639 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6-7-dv9A0A075B639 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6-7-dv9A0A075B639 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6-7-dv9A0A075B639 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6-7-dv9A0A075B639 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6-7-dv9A0A075B639 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6-7-dv9A0A075B639 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6-7-dv9A0A075B639 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trav6-7-dv9A0A075B639 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trav6-7-dv9A0A075B639 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trav6-7-dv9A0A075B639 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6-7-dv9A0A075B639 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.32■□□□□ 0.2
Trav6-7-dv9A0A075B639 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6-7-dv9A0A075B639 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-7-dv9A0A075B639 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trav6-7-dv9A0A075B639 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-7-dv9A0A075B639 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-7-dv9A0A075B639 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-7-dv9A0A075B639 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-7-dv9A0A075B639 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-7-dv9A0A075B639 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Trav6-7-dv9A0A075B639 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-7-dv9A0A075B639 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-7-dv9A0A075B639 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-7-dv9A0A075B639 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-7-dv9A0A075B639 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-7-dv9A0A075B639 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-7-dv9A0A075B639 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-7-dv9A0A075B639 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-7-dv9A0A075B639 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav6-7-dv9A0A075B639 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-7-dv9A0A075B639 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-7-dv9A0A075B639 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.3■□□□□ 0.2
Trav6-7-dv9A0A075B639 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-7-dv9A0A075B639 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-7-dv9A0A075B639 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav6-7-dv9A0A075B639 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.3■□□□□ 0.2
Trav6-7-dv9A0A075B639 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-7-dv9A0A075B639 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.3■□□□□ 0.2
Trav6-7-dv9A0A075B639 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-7-dv9A0A075B639 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-7-dv9A0A075B639 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-7-dv9A0A075B639 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-7-dv9A0A075B639 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-7-dv9A0A075B639 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-7-dv9A0A075B639 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-7-dv9A0A075B639 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-7-dv9A0A075B639 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.29■□□□□ 0.2
Trav6-7-dv9A0A075B639 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-7-dv9A0A075B639 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-7-dv9A0A075B639 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-7-dv9A0A075B639 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-7-dv9A0A075B639 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-7-dv9A0A075B639 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-7-dv9A0A075B639 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.29■□□□□ 0.2
Trav6-7-dv9A0A075B639 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-7-dv9A0A075B639 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-7-dv9A0A075B639 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-7-dv9A0A075B639 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-7-dv9A0A075B639 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-7-dv9A0A075B639 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-7-dv9A0A075B639 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-7-dv9A0A075B639 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-7-dv9A0A075B639 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-7-dv9A0A075B639 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-7-dv9A0A075B639 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-7-dv9A0A075B639 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-7-dv9A0A075B639 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.28■□□□□ 0.2
Trav6-7-dv9A0A075B639 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-7-dv9A0A075B639 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-7-dv9A0A075B639 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-7-dv9A0A075B639 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-7-dv9A0A075B639 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.28■□□□□ 0.2
Trav6-7-dv9A0A075B639 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-7-dv9A0A075B639 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.28■□□□□ 0.2
Trav6-7-dv9A0A075B639 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trav6-7-dv9A0A075B639 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-7-dv9A0A075B639 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-7-dv9A0A075B639 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-7-dv9A0A075B639 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-7-dv9A0A075B639 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-7-dv9A0A075B639 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms