Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.66■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.66■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.65■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.65■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.65■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Gm9847-201ENSMUST00000052528 599 ntBASIC15.65■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Gm27801-201ENSMUST00000184174 223 ntBASIC15.64■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.64■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.64■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Gm12251-201ENSMUST00000117893 792 ntBASIC15.63■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Flvcr1-202ENSMUST00000191946 1216 ntBASIC15.62■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.62■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.62■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms