Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7n-4A0A075B620 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7n-4A0A075B620 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7n-4A0A075B620 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7n-4A0A075B620 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trav7n-4A0A075B620 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7n-4A0A075B620 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Trav7n-4A0A075B620 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7n-4A0A075B620 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7n-4A0A075B620 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7n-4A0A075B620 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Trav7n-4A0A075B620 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.96□□□□□ -0.18
Trav7n-4A0A075B620 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Trav7n-4A0A075B620 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav7n-4A0A075B620 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav7n-4A0A075B620 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav7n-4A0A075B620 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7n-4A0A075B620 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7n-4A0A075B620 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7n-4A0A075B620 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7n-4A0A075B620 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7n-4A0A075B620 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7n-4A0A075B620 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7n-4A0A075B620 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7n-4A0A075B620 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Trav7n-4A0A075B620 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7n-4A0A075B620 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC13.95□□□□□ -0.18
Trav7n-4A0A075B620 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Trav7n-4A0A075B620 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7n-4A0A075B620 Gm10232-201ENSMUST00000089221 720 ntBASIC13.95□□□□□ -0.18
Trav7n-4A0A075B620 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7n-4A0A075B620 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav7n-4A0A075B620 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav7n-4A0A075B620 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC13.95□□□□□ -0.18
Trav7n-4A0A075B620 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7n-4A0A075B620 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7n-4A0A075B620 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7n-4A0A075B620 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7n-4A0A075B620 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7n-4A0A075B620 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7n-4A0A075B620 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav7n-4A0A075B620 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7n-4A0A075B620 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.94□□□□□ -0.18
Trav7n-4A0A075B620 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7n-4A0A075B620 Serp2-204ENSMUST00000228055 705 ntBASIC13.94□□□□□ -0.18
Trav7n-4A0A075B620 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7n-4A0A075B620 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav7n-4A0A075B620 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7n-4A0A075B620 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7n-4A0A075B620 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav7n-4A0A075B620 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7n-4A0A075B620 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7n-4A0A075B620 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7n-4A0A075B620 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7n-4A0A075B620 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.94□□□□□ -0.18
Trav7n-4A0A075B620 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7n-4A0A075B620 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-4A0A075B620 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-4A0A075B620 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-4A0A075B620 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-4A0A075B620 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-4A0A075B620 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-4A0A075B620 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-4A0A075B620 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-4A0A075B620 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-4A0A075B620 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trav7n-4A0A075B620 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-4A0A075B620 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-4A0A075B620 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-4A0A075B620 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-4A0A075B620 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav7n-4A0A075B620 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-4A0A075B620 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7n-4A0A075B620 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7n-4A0A075B620 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav7n-4A0A075B620 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7n-4A0A075B620 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7n-4A0A075B620 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7n-4A0A075B620 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7n-4A0A075B620 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7n-4A0A075B620 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Trav7n-4A0A075B620 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7n-4A0A075B620 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC13.92□□□□□ -0.18
Trav7n-4A0A075B620 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC13.92□□□□□ -0.18
Trav7n-4A0A075B620 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trav7n-4A0A075B620 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav7n-4A0A075B620 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7n-4A0A075B620 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7n-4A0A075B620 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7n-4A0A075B620 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7n-4A0A075B620 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7n-4A0A075B620 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trav7n-4A0A075B620 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav7n-4A0A075B620 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav7n-4A0A075B620 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav7n-4A0A075B620 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav7n-4A0A075B620 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav7n-4A0A075B620 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav7n-4A0A075B620 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav7n-4A0A075B620 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms