Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-1A0A075B606 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13d-1A0A075B606 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13d-1A0A075B606 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13d-1A0A075B606 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13d-1A0A075B606 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13d-1A0A075B606 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13d-1A0A075B606 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13d-1A0A075B606 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13d-1A0A075B606 Gm38342-201ENSMUST00000195710 2980 ntBASIC13.46□□□□□ -0.25
Trav13d-1A0A075B606 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13d-1A0A075B606 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Trav13d-1A0A075B606 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Trav13d-1A0A075B606 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13d-1A0A075B606 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.46□□□□□ -0.25
Trav13d-1A0A075B606 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13d-1A0A075B606 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13d-1A0A075B606 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13d-1A0A075B606 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13d-1A0A075B606 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Trav13d-1A0A075B606 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Trav13d-1A0A075B606 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13d-1A0A075B606 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC13.46□□□□□ -0.26
Trav13d-1A0A075B606 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13d-1A0A075B606 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13d-1A0A075B606 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13d-1A0A075B606 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-1A0A075B606 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-1A0A075B606 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-1A0A075B606 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-1A0A075B606 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-1A0A075B606 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-1A0A075B606 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-1A0A075B606 Gm13148-201ENSMUST00000118892 745 ntBASIC13.45□□□□□ -0.26
Trav13d-1A0A075B606 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav13d-1A0A075B606 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-1A0A075B606 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-1A0A075B606 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-1A0A075B606 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-1A0A075B606 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav13d-1A0A075B606 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav13d-1A0A075B606 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-1A0A075B606 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-1A0A075B606 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-1A0A075B606 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-1A0A075B606 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav13d-1A0A075B606 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-1A0A075B606 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-1A0A075B606 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-1A0A075B606 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-1A0A075B606 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-1A0A075B606 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-1A0A075B606 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Trav13d-1A0A075B606 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav13d-1A0A075B606 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-1A0A075B606 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-1A0A075B606 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.44□□□□□ -0.26
Trav13d-1A0A075B606 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-1A0A075B606 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trav13d-1A0A075B606 Gm4968-201ENSMUST00000071458 858 ntBASIC13.44□□□□□ -0.26
Trav13d-1A0A075B606 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-1A0A075B606 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-1A0A075B606 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-1A0A075B606 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-1A0A075B606 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-1A0A075B606 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-1A0A075B606 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-1A0A075B606 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-1A0A075B606 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav13d-1A0A075B606 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-1A0A075B606 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-1A0A075B606 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-1A0A075B606 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-1A0A075B606 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-1A0A075B606 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-1A0A075B606 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-1A0A075B606 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-1A0A075B606 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13.43□□□□□ -0.26
Trav13d-1A0A075B606 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-1A0A075B606 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trav13d-1A0A075B606 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-1A0A075B606 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-1A0A075B606 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav13d-1A0A075B606 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-1A0A075B606 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav13d-1A0A075B606 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav13d-1A0A075B606 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-1A0A075B606 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-1A0A075B606 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-1A0A075B606 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav13d-1A0A075B606 AC131586.2-201ENSMUST00000228370 1512 ntBASIC13.43□□□□□ -0.26
Trav13d-1A0A075B606 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-1A0A075B606 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-1A0A075B606 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Trav13d-1A0A075B606 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-1A0A075B606 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-1A0A075B606 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-1A0A075B606 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-1A0A075B606 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-1A0A075B606 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms