Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6-6A0A075B603 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6-6A0A075B603 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav6-6A0A075B603 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-6A0A075B603 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.7□□□□□ -0.22
Trav6-6A0A075B603 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC13.7□□□□□ -0.22
Trav6-6A0A075B603 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-6A0A075B603 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-6A0A075B603 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-6A0A075B603 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav6-6A0A075B603 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-6A0A075B603 Gm10571-201ENSMUST00000097869 1638 ntBASIC13.7□□□□□ -0.22
Trav6-6A0A075B603 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-6A0A075B603 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-6A0A075B603 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-6A0A075B603 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.7□□□□□ -0.22
Trav6-6A0A075B603 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-6A0A075B603 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-6A0A075B603 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-6A0A075B603 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-6A0A075B603 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-6A0A075B603 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-6A0A075B603 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav6-6A0A075B603 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-6A0A075B603 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-6A0A075B603 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-6A0A075B603 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-6A0A075B603 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Trav6-6A0A075B603 Gm42911-201ENSMUST00000199360 1630 ntBASIC13.69□□□□□ -0.22
Trav6-6A0A075B603 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-6A0A075B603 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.69□□□□□ -0.22
Trav6-6A0A075B603 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-6A0A075B603 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-6A0A075B603 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC13.69□□□□□ -0.22
Trav6-6A0A075B603 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-6A0A075B603 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav6-6A0A075B603 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-6A0A075B603 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-6A0A075B603 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-6A0A075B603 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-6A0A075B603 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-6A0A075B603 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-6A0A075B603 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-6A0A075B603 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-6A0A075B603 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav6-6A0A075B603 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-6A0A075B603 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-6A0A075B603 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav6-6A0A075B603 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-6A0A075B603 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-6A0A075B603 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-6A0A075B603 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-6A0A075B603 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-6A0A075B603 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-6A0A075B603 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-6A0A075B603 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav6-6A0A075B603 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-6A0A075B603 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-6A0A075B603 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-6A0A075B603 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav6-6A0A075B603 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-6A0A075B603 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC13.68□□□□□ -0.22
Trav6-6A0A075B603 Gm7160-202ENSMUST00000188519 1027 ntBASIC13.68□□□□□ -0.22
Trav6-6A0A075B603 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-6A0A075B603 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-6A0A075B603 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-6A0A075B603 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.67□□□□□ -0.22
Trav6-6A0A075B603 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-6A0A075B603 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-6A0A075B603 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-6A0A075B603 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-6A0A075B603 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-6A0A075B603 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-6A0A075B603 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-6A0A075B603 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-6A0A075B603 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav6-6A0A075B603 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC13.67□□□□□ -0.22
Trav6-6A0A075B603 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC13.67□□□□□ -0.22
Trav6-6A0A075B603 Serp2-204ENSMUST00000228055 705 ntBASIC13.67□□□□□ -0.22
Trav6-6A0A075B603 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-6A0A075B603 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-6A0A075B603 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-6A0A075B603 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-6A0A075B603 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-6A0A075B603 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-6A0A075B603 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-6A0A075B603 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-6A0A075B603 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav6-6A0A075B603 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-6A0A075B603 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-6A0A075B603 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Trav6-6A0A075B603 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC13.66□□□□□ -0.22
Trav6-6A0A075B603 Gm37352-201ENSMUST00000193908 2181 ntBASIC13.66□□□□□ -0.22
Trav6-6A0A075B603 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-6A0A075B603 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.66□□□□□ -0.22
Trav6-6A0A075B603 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-6A0A075B603 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-6A0A075B603 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-6A0A075B603 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-6A0A075B603 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms