Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-1A0A075B5Z8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-1A0A075B5Z8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-1A0A075B5Z8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-1A0A075B5Z8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-1A0A075B5Z8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-1A0A075B5Z8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-1A0A075B5Z8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-1A0A075B5Z8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-1A0A075B5Z8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-1A0A075B5Z8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-1A0A075B5Z8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-1A0A075B5Z8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-1A0A075B5Z8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-1A0A075B5Z8 Gm9847-201ENSMUST00000052528 599 ntBASIC14.79□□□□□ -0.04
Trav6-1A0A075B5Z8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-1A0A075B5Z8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-1A0A075B5Z8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-1A0A075B5Z8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-1A0A075B5Z8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-1A0A075B5Z8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trav6-1A0A075B5Z8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-1A0A075B5Z8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-1A0A075B5Z8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-1A0A075B5Z8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-1A0A075B5Z8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-1A0A075B5Z8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-1A0A075B5Z8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-1A0A075B5Z8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-1A0A075B5Z8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-1A0A075B5Z8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-1A0A075B5Z8 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.78□□□□□ -0.04
Trav6-1A0A075B5Z8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-1A0A075B5Z8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-1A0A075B5Z8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trav6-1A0A075B5Z8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-1A0A075B5Z8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-1A0A075B5Z8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-1A0A075B5Z8 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.78□□□□□ -0.04
Trav6-1A0A075B5Z8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-1A0A075B5Z8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-1A0A075B5Z8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.77□□□□□ -0.04
Trav6-1A0A075B5Z8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6-1A0A075B5Z8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.77□□□□□ -0.04
Trav6-1A0A075B5Z8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6-1A0A075B5Z8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6-1A0A075B5Z8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6-1A0A075B5Z8 Gm8969-201ENSMUST00000199694 526 ntBASIC14.77□□□□□ -0.05
Trav6-1A0A075B5Z8 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.77□□□□□ -0.05
Trav6-1A0A075B5Z8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC14.77□□□□□ -0.05
Trav6-1A0A075B5Z8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6-1A0A075B5Z8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6-1A0A075B5Z8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trav6-1A0A075B5Z8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6-1A0A075B5Z8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6-1A0A075B5Z8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.77□□□□□ -0.05
Trav6-1A0A075B5Z8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.77□□□□□ -0.05
Trav6-1A0A075B5Z8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6-1A0A075B5Z8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trav6-1A0A075B5Z8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-1A0A075B5Z8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trav6-1A0A075B5Z8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-1A0A075B5Z8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-1A0A075B5Z8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.76□□□□□ -0.05
Trav6-1A0A075B5Z8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-1A0A075B5Z8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-1A0A075B5Z8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.76□□□□□ -0.05
Trav6-1A0A075B5Z8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-1A0A075B5Z8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-1A0A075B5Z8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-1A0A075B5Z8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-1A0A075B5Z8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-1A0A075B5Z8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-1A0A075B5Z8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-1A0A075B5Z8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav6-1A0A075B5Z8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-1A0A075B5Z8 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.76□□□□□ -0.05
Trav6-1A0A075B5Z8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-1A0A075B5Z8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-1A0A075B5Z8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-1A0A075B5Z8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-1A0A075B5Z8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-1A0A075B5Z8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-1A0A075B5Z8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-1A0A075B5Z8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-1A0A075B5Z8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-1A0A075B5Z8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav6-1A0A075B5Z8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-1A0A075B5Z8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC14.75□□□□□ -0.05
Trav6-1A0A075B5Z8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav6-1A0A075B5Z8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-1A0A075B5Z8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Trav6-1A0A075B5Z8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-1A0A075B5Z8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav6-1A0A075B5Z8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-1A0A075B5Z8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-1A0A075B5Z8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-1A0A075B5Z8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav6-1A0A075B5Z8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-1A0A075B5Z8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms