Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.9■□□□□ 0.94
Sft2d3Q9CSV6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sft2d3Q9CSV6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sft2d3Q9CSV6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sft2d3Q9CSV6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sft2d3Q9CSV6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sft2d3Q9CSV6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sft2d3Q9CSV6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Sft2d3Q9CSV6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Sft2d3Q9CSV6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sft2d3Q9CSV6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Sft2d3Q9CSV6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sft2d3Q9CSV6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.86■□□□□ 0.93
Sft2d3Q9CSV6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sft2d3Q9CSV6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sft2d3Q9CSV6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sft2d3Q9CSV6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sft2d3Q9CSV6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sft2d3Q9CSV6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sft2d3Q9CSV6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Sft2d3Q9CSV6 Gm24970-201ENSMUST00000175582 82 ntBASIC20.84■□□□□ 0.93
Sft2d3Q9CSV6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.84■□□□□ 0.93
Sft2d3Q9CSV6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sft2d3Q9CSV6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sft2d3Q9CSV6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sft2d3Q9CSV6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Sft2d3Q9CSV6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Sft2d3Q9CSV6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sft2d3Q9CSV6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Sft2d3Q9CSV6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sft2d3Q9CSV6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sft2d3Q9CSV6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Sft2d3Q9CSV6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sft2d3Q9CSV6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sft2d3Q9CSV6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sft2d3Q9CSV6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Sft2d3Q9CSV6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sft2d3Q9CSV6 Amer2-203ENSMUST00000225247 2662 ntBASIC20.78■□□□□ 0.92
Sft2d3Q9CSV6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sft2d3Q9CSV6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Sft2d3Q9CSV6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Sft2d3Q9CSV6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sft2d3Q9CSV6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sft2d3Q9CSV6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sft2d3Q9CSV6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sft2d3Q9CSV6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.73■□□□□ 0.91
Sft2d3Q9CSV6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sft2d3Q9CSV6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sft2d3Q9CSV6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sft2d3Q9CSV6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Sft2d3Q9CSV6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sft2d3Q9CSV6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sft2d3Q9CSV6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sft2d3Q9CSV6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sft2d3Q9CSV6 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.7■□□□□ 0.9
Sft2d3Q9CSV6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sft2d3Q9CSV6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sft2d3Q9CSV6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sft2d3Q9CSV6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sft2d3Q9CSV6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sft2d3Q9CSV6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sft2d3Q9CSV6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Sft2d3Q9CSV6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Sft2d3Q9CSV6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sft2d3Q9CSV6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.66■□□□□ 0.9
Sft2d3Q9CSV6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Sft2d3Q9CSV6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
Sft2d3Q9CSV6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Sft2d3Q9CSV6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sft2d3Q9CSV6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sft2d3Q9CSV6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.64■□□□□ 0.89
Sft2d3Q9CSV6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Sft2d3Q9CSV6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sft2d3Q9CSV6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sft2d3Q9CSV6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sft2d3Q9CSV6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Sft2d3Q9CSV6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sft2d3Q9CSV6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sft2d3Q9CSV6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.61■□□□□ 0.89
Sft2d3Q9CSV6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sft2d3Q9CSV6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sft2d3Q9CSV6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Sft2d3Q9CSV6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.6■□□□□ 0.89
Sft2d3Q9CSV6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Sft2d3Q9CSV6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sft2d3Q9CSV6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Sft2d3Q9CSV6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sft2d3Q9CSV6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sft2d3Q9CSV6 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.59■□□□□ 0.89
Sft2d3Q9CSV6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.59■□□□□ 0.89
Sft2d3Q9CSV6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sft2d3Q9CSV6 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.58■□□□□ 0.89
Sft2d3Q9CSV6 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.58■□□□□ 0.88
Sft2d3Q9CSV6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sft2d3Q9CSV6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Sft2d3Q9CSV6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sft2d3Q9CSV6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sft2d3Q9CSV6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Sft2d3Q9CSV6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sft2d3Q9CSV6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms