Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
Pcdha1Q91Y21 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Pcdha1Q91Y21 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Pcdha1Q91Y21 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
Pcdha1Q91Y21 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.06■■□□□ 1.76
Pcdha1Q91Y21 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Pcdha1Q91Y21 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Pcdha1Q91Y21 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.06■■□□□ 1.76
Pcdha1Q91Y21 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Pcdha1Q91Y21 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.03■■□□□ 1.76
Pcdha1Q91Y21 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Pcdha1Q91Y21 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Pcdha1Q91Y21 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
Pcdha1Q91Y21 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.01■■□□□ 1.75
Pcdha1Q91Y21 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Pcdha1Q91Y21 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
Pcdha1Q91Y21 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Pcdha1Q91Y21 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26■■□□□ 1.75
Pcdha1Q91Y21 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Pcdha1Q91Y21 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Pcdha1Q91Y21 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Pcdha1Q91Y21 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Pcdha1Q91Y21 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.95■■□□□ 1.75
Pcdha1Q91Y21 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Pcdha1Q91Y21 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.95■■□□□ 1.74
Pcdha1Q91Y21 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.94■■□□□ 1.74
Pcdha1Q91Y21 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Pcdha1Q91Y21 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
Pcdha1Q91Y21 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Pcdha1Q91Y21 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Pcdha1Q91Y21 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.91■■□□□ 1.74
Pcdha1Q91Y21 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
Pcdha1Q91Y21 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
Pcdha1Q91Y21 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
Pcdha1Q91Y21 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Pcdha1Q91Y21 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Pcdha1Q91Y21 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
Pcdha1Q91Y21 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Pcdha1Q91Y21 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Pcdha1Q91Y21 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.87■■□□□ 1.73
Pcdha1Q91Y21 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
Pcdha1Q91Y21 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Pcdha1Q91Y21 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Pcdha1Q91Y21 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
Pcdha1Q91Y21 Zxda-201ENSMUST00000117281 2621 ntBASIC25.85■■□□□ 1.73
Pcdha1Q91Y21 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Pcdha1Q91Y21 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Pcdha1Q91Y21 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.84■■□□□ 1.73
Pcdha1Q91Y21 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Pcdha1Q91Y21 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
Pcdha1Q91Y21 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Pcdha1Q91Y21 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Pcdha1Q91Y21 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
Pcdha1Q91Y21 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Pcdha1Q91Y21 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Pcdha1Q91Y21 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC25.8■■□□□ 1.72
Pcdha1Q91Y21 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Pcdha1Q91Y21 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Pcdha1Q91Y21 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Pcdha1Q91Y21 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Pcdha1Q91Y21 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Pcdha1Q91Y21 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdha1Q91Y21 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdha1Q91Y21 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdha1Q91Y21 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdha1Q91Y21 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdha1Q91Y21 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdha1Q91Y21 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdha1Q91Y21 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.73■■□□□ 1.71
Pcdha1Q91Y21 Gm8503-201ENSMUST00000118131 455 ntBASIC25.73■■□□□ 1.71
Pcdha1Q91Y21 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25.73■■□□□ 1.71
Pcdha1Q91Y21 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.72■■□□□ 1.71
Pcdha1Q91Y21 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdha1Q91Y21 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
Pcdha1Q91Y21 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdha1Q91Y21 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Pcdha1Q91Y21 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.71■■□□□ 1.71
Pcdha1Q91Y21 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
Pcdha1Q91Y21 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
Pcdha1Q91Y21 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdha1Q91Y21 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdha1Q91Y21 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
Pcdha1Q91Y21 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pcdha1Q91Y21 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.67■■□□□ 1.7
Pcdha1Q91Y21 Gm6821-201ENSMUST00000107540 542 ntBASIC25.67■■□□□ 1.7
Pcdha1Q91Y21 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdha1Q91Y21 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdha1Q91Y21 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdha1Q91Y21 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Pcdha1Q91Y21 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Pcdha1Q91Y21 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
Pcdha1Q91Y21 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdha1Q91Y21 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdha1Q91Y21 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdha1Q91Y21 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdha1Q91Y21 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdha1Q91Y21 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdha1Q91Y21 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.61■■□□□ 1.69
Pcdha1Q91Y21 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25.6■■□□□ 1.69
Pcdha1Q91Y21 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 10 ms