Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Pcdha9Q91Y11 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.65■■□□□ 1.86
Pcdha9Q91Y11 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Pcdha9Q91Y11 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Pcdha9Q91Y11 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pcdha9Q91Y11 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.63■■□□□ 1.85
Pcdha9Q91Y11 Gm9397-201ENSMUST00000200125 605 ntBASIC26.63■■□□□ 1.85
Pcdha9Q91Y11 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.61■■□□□ 1.85
Pcdha9Q91Y11 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Pcdha9Q91Y11 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Pcdha9Q91Y11 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Pcdha9Q91Y11 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdha9Q91Y11 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdha9Q91Y11 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdha9Q91Y11 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
Pcdha9Q91Y11 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Pcdha9Q91Y11 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Pcdha9Q91Y11 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Pcdha9Q91Y11 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.54■■□□□ 1.84
Pcdha9Q91Y11 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdha9Q91Y11 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.53■■□□□ 1.84
Pcdha9Q91Y11 Gm45855-201ENSMUST00000212546 880 ntBASIC26.53■■□□□ 1.84
Pcdha9Q91Y11 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26.53■■□□□ 1.84
Pcdha9Q91Y11 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.52■■□□□ 1.84
Pcdha9Q91Y11 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.52■■□□□ 1.84
Pcdha9Q91Y11 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.84
Pcdha9Q91Y11 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
Pcdha9Q91Y11 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Pcdha9Q91Y11 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26.5■■□□□ 1.83
Pcdha9Q91Y11 Gm24970-201ENSMUST00000175582 82 ntBASIC26.49■■□□□ 1.83
Pcdha9Q91Y11 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.49■■□□□ 1.83
Pcdha9Q91Y11 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Pcdha9Q91Y11 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Pcdha9Q91Y11 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.49■■□□□ 1.83
Pcdha9Q91Y11 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.48■■□□□ 1.83
Pcdha9Q91Y11 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdha9Q91Y11 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdha9Q91Y11 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.47■■□□□ 1.83
Pcdha9Q91Y11 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.47■■□□□ 1.83
Pcdha9Q91Y11 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdha9Q91Y11 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
Pcdha9Q91Y11 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pcdha9Q91Y11 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Pcdha9Q91Y11 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
Pcdha9Q91Y11 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
Pcdha9Q91Y11 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Pcdha9Q91Y11 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Pcdha9Q91Y11 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.38■■□□□ 1.81
Pcdha9Q91Y11 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdha9Q91Y11 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdha9Q91Y11 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdha9Q91Y11 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.37■■□□□ 1.81
Pcdha9Q91Y11 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.37■■□□□ 1.81
Pcdha9Q91Y11 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Pcdha9Q91Y11 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.37■■□□□ 1.81
Pcdha9Q91Y11 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Pcdha9Q91Y11 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Pcdha9Q91Y11 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pcdha9Q91Y11 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.36■■□□□ 1.81
Pcdha9Q91Y11 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pcdha9Q91Y11 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.35■■□□□ 1.81
Pcdha9Q91Y11 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.35■■□□□ 1.81
Pcdha9Q91Y11 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pcdha9Q91Y11 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pcdha9Q91Y11 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.34■■□□□ 1.81
Pcdha9Q91Y11 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.34■■□□□ 1.81
Pcdha9Q91Y11 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Pcdha9Q91Y11 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
Pcdha9Q91Y11 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Pcdha9Q91Y11 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
Pcdha9Q91Y11 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Pcdha9Q91Y11 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pcdha9Q91Y11 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdha9Q91Y11 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
Pcdha9Q91Y11 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.29■■□□□ 1.8
Pcdha9Q91Y11 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pcdha9Q91Y11 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdha9Q91Y11 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Pcdha9Q91Y11 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.24■■□□□ 1.79
Pcdha9Q91Y11 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Pcdha9Q91Y11 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Pcdha9Q91Y11 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Pcdha9Q91Y11 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdha9Q91Y11 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdha9Q91Y11 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Pcdha9Q91Y11 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Pcdha9Q91Y11 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Pcdha9Q91Y11 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Pcdha9Q91Y11 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.2■■□□□ 1.78
Pcdha9Q91Y11 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Pcdha9Q91Y11 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
Pcdha9Q91Y11 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
Pcdha9Q91Y11 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Pcdha9Q91Y11 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
Pcdha9Q91Y11 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
Pcdha9Q91Y11 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
Pcdha9Q91Y11 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Pcdha9Q91Y11 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Pcdha9Q91Y11 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Pcdha9Q91Y11 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms