Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Pcdhb1Q91Y08 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Pcdhb1Q91Y08 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Pcdhb1Q91Y08 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Pcdhb1Q91Y08 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.92■■□□□ 1.74
Pcdhb1Q91Y08 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.91■■□□□ 1.74
Pcdhb1Q91Y08 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
Pcdhb1Q91Y08 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.91■■□□□ 1.74
Pcdhb1Q91Y08 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Pcdhb1Q91Y08 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.89■■□□□ 1.74
Pcdhb1Q91Y08 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Pcdhb1Q91Y08 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Pcdhb1Q91Y08 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Pcdhb1Q91Y08 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Pcdhb1Q91Y08 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Pcdhb1Q91Y08 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Pcdhb1Q91Y08 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
Pcdhb1Q91Y08 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Pcdhb1Q91Y08 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.85■■□□□ 1.73
Pcdhb1Q91Y08 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Pcdhb1Q91Y08 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Pcdhb1Q91Y08 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Pcdhb1Q91Y08 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Pcdhb1Q91Y08 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Pcdhb1Q91Y08 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.81■■□□□ 1.72
Pcdhb1Q91Y08 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.81■■□□□ 1.72
Pcdhb1Q91Y08 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Pcdhb1Q91Y08 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Pcdhb1Q91Y08 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC25.8■■□□□ 1.72
Pcdhb1Q91Y08 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Pcdhb1Q91Y08 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.79■■□□□ 1.72
Pcdhb1Q91Y08 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.78■■□□□ 1.72
Pcdhb1Q91Y08 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Pcdhb1Q91Y08 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Pcdhb1Q91Y08 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Pcdhb1Q91Y08 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Pcdhb1Q91Y08 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
Pcdhb1Q91Y08 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Pcdhb1Q91Y08 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdhb1Q91Y08 Amer2-203ENSMUST00000225247 2662 ntBASIC25.74■■□□□ 1.71
Pcdhb1Q91Y08 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdhb1Q91Y08 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.73■■□□□ 1.71
Pcdhb1Q91Y08 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Pcdhb1Q91Y08 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdhb1Q91Y08 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Pcdhb1Q91Y08 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdhb1Q91Y08 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdhb1Q91Y08 Zfp131-205ENSMUST00000223812 663 ntBASIC25.69■■□□□ 1.7
Pcdhb1Q91Y08 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.68■■□□□ 1.7
Pcdhb1Q91Y08 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pcdhb1Q91Y08 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.66■■□□□ 1.7
Pcdhb1Q91Y08 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
Pcdhb1Q91Y08 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdhb1Q91Y08 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdhb1Q91Y08 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Pcdhb1Q91Y08 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhb1Q91Y08 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhb1Q91Y08 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.63■■□□□ 1.69
Pcdhb1Q91Y08 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
Pcdhb1Q91Y08 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhb1Q91Y08 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.61■■□□□ 1.69
Pcdhb1Q91Y08 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdhb1Q91Y08 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdhb1Q91Y08 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Pcdhb1Q91Y08 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.58■■□□□ 1.69
Pcdhb1Q91Y08 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Pcdhb1Q91Y08 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Pcdhb1Q91Y08 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.57■■□□□ 1.68
Pcdhb1Q91Y08 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdhb1Q91Y08 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdhb1Q91Y08 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.57■■□□□ 1.68
Pcdhb1Q91Y08 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdhb1Q91Y08 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
Pcdhb1Q91Y08 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdhb1Q91Y08 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdhb1Q91Y08 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdhb1Q91Y08 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.54■■□□□ 1.68
Pcdhb1Q91Y08 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.54■■□□□ 1.68
Pcdhb1Q91Y08 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdhb1Q91Y08 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdhb1Q91Y08 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdhb1Q91Y08 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdhb1Q91Y08 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdhb1Q91Y08 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Pcdhb1Q91Y08 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdhb1Q91Y08 Gm9397-201ENSMUST00000200125 605 ntBASIC25.51■■□□□ 1.67
Pcdhb1Q91Y08 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.51■■□□□ 1.67
Pcdhb1Q91Y08 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdhb1Q91Y08 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdhb1Q91Y08 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdhb1Q91Y08 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Pcdhb1Q91Y08 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.48■■□□□ 1.67
Pcdhb1Q91Y08 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Pcdhb1Q91Y08 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Pcdhb1Q91Y08 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Pcdhb1Q91Y08 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Pcdhb1Q91Y08 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.46■■□□□ 1.67
Pcdhb1Q91Y08 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Pcdhb1Q91Y08 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC25.46■■□□□ 1.67
Pcdhb1Q91Y08 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 9.9 ms