Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC28,81■■■□□ 2,2
Samm50Q8BGH2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC28,8■■■□□ 2,2
Samm50Q8BGH2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC28,8■■■□□ 2,2
Samm50Q8BGH2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC28,8■■■□□ 2,2
Samm50Q8BGH2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC28,79■■■□□ 2,2
Samm50Q8BGH2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC28,79■■■□□ 2,2
Samm50Q8BGH2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC28,79■■■□□ 2,2
Samm50Q8BGH2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC28,79■■■□□ 2,2
Samm50Q8BGH2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC28,78■■■□□ 2,2
Samm50Q8BGH2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC28,77■■■□□ 2,2
Samm50Q8BGH2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC28,77■■■□□ 2,2
Samm50Q8BGH2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28,77■■■□□ 2,2
Samm50Q8BGH2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC28,77■■■□□ 2,2
Samm50Q8BGH2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC28,76■■■□□ 2,19
Samm50Q8BGH2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC28,76■■■□□ 2,19
Samm50Q8BGH2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28,75■■■□□ 2,19
Samm50Q8BGH2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC28,74■■■□□ 2,19
Samm50Q8BGH2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC28,74■■■□□ 2,19
Samm50Q8BGH2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC28,74■■■□□ 2,19
Samm50Q8BGH2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC28,74■■■□□ 2,19
Samm50Q8BGH2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC28,72■■■□□ 2,19
Samm50Q8BGH2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC28,71■■■□□ 2,19
Samm50Q8BGH2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC28,7■■■□□ 2,19
Samm50Q8BGH2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC28,7■■■□□ 2,19
Samm50Q8BGH2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC28,69■■■□□ 2,18
Samm50Q8BGH2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC28,69■■■□□ 2,18
Samm50Q8BGH2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC28,69■■■□□ 2,18
Samm50Q8BGH2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC28,68■■■□□ 2,18
Samm50Q8BGH2 Fezf2-202ENSMUST00000224023 1917 ntBASIC28,68■■■□□ 2,18
Samm50Q8BGH2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC28,68■■■□□ 2,18
Samm50Q8BGH2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC28,67■■■□□ 2,18
Samm50Q8BGH2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC28,67■■■□□ 2,18
Samm50Q8BGH2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC28,67■■■□□ 2,18
Samm50Q8BGH2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC28,66■■■□□ 2,18
Samm50Q8BGH2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC28,66■■■□□ 2,18
Samm50Q8BGH2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC28,65■■■□□ 2,18
Samm50Q8BGH2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC28,64■■■□□ 2,18
Samm50Q8BGH2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC28,63■■■□□ 2,17
Samm50Q8BGH2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC28,63■■■□□ 2,17
Samm50Q8BGH2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC28,63■■■□□ 2,17
Samm50Q8BGH2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC28,62■■■□□ 2,17
Samm50Q8BGH2 Gm30346-201ENSMUST00000218641 1699 ntBASIC28,61■■■□□ 2,17
Samm50Q8BGH2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC28,61■■■□□ 2,17
Samm50Q8BGH2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28,61■■■□□ 2,17
Samm50Q8BGH2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC28,59■■■□□ 2,17
Samm50Q8BGH2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC28,59■■■□□ 2,17
Samm50Q8BGH2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC28,58■■■□□ 2,17
Samm50Q8BGH2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC28,58■■■□□ 2,17
Samm50Q8BGH2 Gm45855-201ENSMUST00000212546 880 ntBASIC28,58■■■□□ 2,17
Samm50Q8BGH2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC28,58■■■□□ 2,17
Samm50Q8BGH2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC28,57■■■□□ 2,16
Samm50Q8BGH2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC28,56■■■□□ 2,16
Samm50Q8BGH2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC28,55■■■□□ 2,16
Samm50Q8BGH2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC28,55■■■□□ 2,16
Samm50Q8BGH2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC28,55■■■□□ 2,16
Samm50Q8BGH2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC28,54■■■□□ 2,16
Samm50Q8BGH2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC28,54■■■□□ 2,16
Samm50Q8BGH2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC28,53■■■□□ 2,16
Samm50Q8BGH2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC28,53■■■□□ 2,16
Samm50Q8BGH2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC28,51■■■□□ 2,16
Samm50Q8BGH2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC28,51■■■□□ 2,15
Samm50Q8BGH2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC28,51■■■□□ 2,15
Samm50Q8BGH2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC28,5■■■□□ 2,15
Samm50Q8BGH2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC28,49■■■□□ 2,15
Samm50Q8BGH2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC28,49■■■□□ 2,15
Samm50Q8BGH2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC28,49■■■□□ 2,15
Samm50Q8BGH2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC28,48■■■□□ 2,15
Samm50Q8BGH2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28,48■■■□□ 2,15
Samm50Q8BGH2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC28,48■■■□□ 2,15
Samm50Q8BGH2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC28,48■■■□□ 2,15
Samm50Q8BGH2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC28,48■■■□□ 2,15
Samm50Q8BGH2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC28,47■■■□□ 2,15
Samm50Q8BGH2 Gm9397-201ENSMUST00000200125 605 ntBASIC28,47■■■□□ 2,15
Samm50Q8BGH2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC28,46■■■□□ 2,15
Samm50Q8BGH2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC28,46■■■□□ 2,15
Samm50Q8BGH2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC28,46■■■□□ 2,15
Samm50Q8BGH2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC28,45■■■□□ 2,14
Samm50Q8BGH2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC28,45■■■□□ 2,14
Samm50Q8BGH2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC28,44■■■□□ 2,14
Samm50Q8BGH2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC28,43■■■□□ 2,14
Samm50Q8BGH2 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC28,43■■■□□ 2,14
Samm50Q8BGH2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC28,42■■■□□ 2,14
Samm50Q8BGH2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC28,42■■■□□ 2,14
Samm50Q8BGH2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC28,42■■■□□ 2,14
Samm50Q8BGH2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC28,42■■■□□ 2,14
Samm50Q8BGH2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC28,41■■■□□ 2,14
Samm50Q8BGH2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC28,41■■■□□ 2,14
Samm50Q8BGH2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC28,41■■■□□ 2,14
Samm50Q8BGH2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC28,41■■■□□ 2,14
Samm50Q8BGH2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC28,4■■■□□ 2,14
Samm50Q8BGH2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC28,39■■■□□ 2,14
Samm50Q8BGH2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC28,39■■■□□ 2,13
Samm50Q8BGH2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC28,39■■■□□ 2,13
Samm50Q8BGH2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC28,38■■■□□ 2,13
Samm50Q8BGH2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC28,36■■■□□ 2,13
Samm50Q8BGH2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC28,36■■■□□ 2,13
Samm50Q8BGH2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC28,35■■■□□ 2,13
Samm50Q8BGH2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC28,35■■■□□ 2,13
Samm50Q8BGH2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC28,34■■■□□ 2,13
Samm50Q8BGH2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC28,34■■■□□ 2,13
Retrieved 100 of 76,532 protein–RNA pairs in 12,4 ms