Protein–RNA interactions for Protein: Q6PCN7

Hltf, Helicase-like transcription factor, mousemouse

Predictions only

Length 1,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HltfQ6PCN7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.82■■□□□ 1.4
HltfQ6PCN7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
HltfQ6PCN7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HltfQ6PCN7 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.81■■□□□ 1.4
HltfQ6PCN7 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HltfQ6PCN7 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HltfQ6PCN7 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
HltfQ6PCN7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HltfQ6PCN7 Gm16148-201ENSMUST00000119653 893 ntBASIC23.79■■□□□ 1.4
HltfQ6PCN7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
HltfQ6PCN7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
HltfQ6PCN7 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.78■■□□□ 1.4
HltfQ6PCN7 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC23.78■■□□□ 1.4
HltfQ6PCN7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HltfQ6PCN7 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.77■■□□□ 1.4
HltfQ6PCN7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
HltfQ6PCN7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
HltfQ6PCN7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
HltfQ6PCN7 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
HltfQ6PCN7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HltfQ6PCN7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
HltfQ6PCN7 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
HltfQ6PCN7 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HltfQ6PCN7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
HltfQ6PCN7 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
HltfQ6PCN7 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HltfQ6PCN7 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
HltfQ6PCN7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.67■■□□□ 1.38
HltfQ6PCN7 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
HltfQ6PCN7 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
HltfQ6PCN7 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
HltfQ6PCN7 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
HltfQ6PCN7 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
HltfQ6PCN7 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HltfQ6PCN7 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HltfQ6PCN7 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
HltfQ6PCN7 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
HltfQ6PCN7 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HltfQ6PCN7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
HltfQ6PCN7 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
HltfQ6PCN7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.63■■□□□ 1.37
HltfQ6PCN7 Zfp131-205ENSMUST00000223812 663 ntBASIC23.63■■□□□ 1.37
HltfQ6PCN7 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
HltfQ6PCN7 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
HltfQ6PCN7 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
HltfQ6PCN7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
HltfQ6PCN7 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.61■■□□□ 1.37
HltfQ6PCN7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
HltfQ6PCN7 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
HltfQ6PCN7 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HltfQ6PCN7 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
HltfQ6PCN7 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.58■■□□□ 1.37
HltfQ6PCN7 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
HltfQ6PCN7 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.36
HltfQ6PCN7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
HltfQ6PCN7 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
HltfQ6PCN7 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
HltfQ6PCN7 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
HltfQ6PCN7 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
HltfQ6PCN7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
HltfQ6PCN7 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
HltfQ6PCN7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
HltfQ6PCN7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.53■■□□□ 1.36
HltfQ6PCN7 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
HltfQ6PCN7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
HltfQ6PCN7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
HltfQ6PCN7 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
HltfQ6PCN7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
HltfQ6PCN7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
HltfQ6PCN7 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
HltfQ6PCN7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
HltfQ6PCN7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
HltfQ6PCN7 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.5■■□□□ 1.35
HltfQ6PCN7 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.48■■□□□ 1.35
HltfQ6PCN7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
HltfQ6PCN7 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
HltfQ6PCN7 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
HltfQ6PCN7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.47■■□□□ 1.35
HltfQ6PCN7 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
HltfQ6PCN7 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.45■■□□□ 1.35
HltfQ6PCN7 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.45■■□□□ 1.34
HltfQ6PCN7 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
HltfQ6PCN7 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
HltfQ6PCN7 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
HltfQ6PCN7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.44■■□□□ 1.34
HltfQ6PCN7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
HltfQ6PCN7 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
HltfQ6PCN7 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
HltfQ6PCN7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
HltfQ6PCN7 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
HltfQ6PCN7 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
HltfQ6PCN7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
HltfQ6PCN7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
HltfQ6PCN7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
HltfQ6PCN7 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
HltfQ6PCN7 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
HltfQ6PCN7 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
HltfQ6PCN7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
HltfQ6PCN7 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
HltfQ6PCN7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms