Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Scube3Q66PY1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Scube3Q66PY1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
Scube3Q66PY1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.26■■□□□ 1.79
Scube3Q66PY1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Scube3Q66PY1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
Scube3Q66PY1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Scube3Q66PY1 Gm24970-201ENSMUST00000175582 82 ntBASIC26.25■■□□□ 1.79
Scube3Q66PY1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Scube3Q66PY1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
Scube3Q66PY1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.23■■□□□ 1.79
Scube3Q66PY1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Scube3Q66PY1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Scube3Q66PY1 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Scube3Q66PY1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.22■■□□□ 1.79
Scube3Q66PY1 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.21■■□□□ 1.79
Scube3Q66PY1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Scube3Q66PY1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Scube3Q66PY1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Scube3Q66PY1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Scube3Q66PY1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Scube3Q66PY1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Scube3Q66PY1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Scube3Q66PY1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Scube3Q66PY1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Scube3Q66PY1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
Scube3Q66PY1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.15■■□□□ 1.78
Scube3Q66PY1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.15■■□□□ 1.78
Scube3Q66PY1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Scube3Q66PY1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Scube3Q66PY1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.13■■□□□ 1.77
Scube3Q66PY1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Scube3Q66PY1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Scube3Q66PY1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
Scube3Q66PY1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Scube3Q66PY1 Zxda-201ENSMUST00000117281 2621 ntBASIC26.11■■□□□ 1.77
Scube3Q66PY1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Scube3Q66PY1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Scube3Q66PY1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Scube3Q66PY1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
Scube3Q66PY1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.08■■□□□ 1.77
Scube3Q66PY1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.07■■□□□ 1.76
Scube3Q66PY1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
Scube3Q66PY1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.07■■□□□ 1.76
Scube3Q66PY1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Scube3Q66PY1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Scube3Q66PY1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Scube3Q66PY1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Scube3Q66PY1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Scube3Q66PY1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Scube3Q66PY1 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.04■■□□□ 1.76
Scube3Q66PY1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Scube3Q66PY1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Scube3Q66PY1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.03■■□□□ 1.76
Scube3Q66PY1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26.02■■□□□ 1.76
Scube3Q66PY1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Scube3Q66PY1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
Scube3Q66PY1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Scube3Q66PY1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Scube3Q66PY1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Scube3Q66PY1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Scube3Q66PY1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
Scube3Q66PY1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Scube3Q66PY1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.75
Scube3Q66PY1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Scube3Q66PY1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC25.94■■□□□ 1.74
Scube3Q66PY1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.94■■□□□ 1.74
Scube3Q66PY1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC25.93■■□□□ 1.74
Scube3Q66PY1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.93■■□□□ 1.74
Scube3Q66PY1 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.92■■□□□ 1.74
Scube3Q66PY1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Scube3Q66PY1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Scube3Q66PY1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.9■■□□□ 1.74
Scube3Q66PY1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Scube3Q66PY1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.89■■□□□ 1.74
Scube3Q66PY1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Scube3Q66PY1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.88■■□□□ 1.73
Scube3Q66PY1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Scube3Q66PY1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Scube3Q66PY1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Scube3Q66PY1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Scube3Q66PY1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
Scube3Q66PY1 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.88■■□□□ 1.73
Scube3Q66PY1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Scube3Q66PY1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Scube3Q66PY1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Scube3Q66PY1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25.87■■□□□ 1.73
Scube3Q66PY1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Scube3Q66PY1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Scube3Q66PY1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.86■■□□□ 1.73
Scube3Q66PY1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Scube3Q66PY1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC25.85■■□□□ 1.73
Scube3Q66PY1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Scube3Q66PY1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.72
Scube3Q66PY1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Scube3Q66PY1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Scube3Q66PY1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Scube3Q66PY1 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.79■■□□□ 1.72
Scube3Q66PY1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Scube3Q66PY1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms